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Merge pull request #51 from quadbio/docs/update_tutorials
Update tutorials with gpt-4.1
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CHANGELOG.md

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### Unreleased
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### 0.1.5 (2025-07-24)
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#### Changed
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- Update tutorials to use `gpt-4.1` {pr}`51`
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### 0.1.4 (2025-03-28)
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#### Added

README.md

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## Costs and models
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The default model is currently `gpt-4o-mini`, which is included in [OpenAI's Free Usage Tier](https://platform.openai.com/docs/guides/rate-limits). Thus, you can get started for free and experiment with our [tutorials](https://cell-annotator.readthedocs.io/en/latest/notebooks/tutorials/index.html) and with your own data. If you want to get accurate cell type labels for complex tissues, we strongly recommend using more powerful models, like `gpt-4o`, or reasoning models like `o3-mini`, for which you will have to pay a small fee to OpenAI. As an orientation, running both tutorials with `o3-mini` will cost around 1 USD.
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The default model is currently `gpt-4o-mini`, which is included in [OpenAI's Free Usage Tier](https://platform.openai.com/docs/guides/rate-limits). Thus, you can get started for free and experiment with our [tutorials](https://cell-annotator.readthedocs.io/en/latest/notebooks/tutorials/index.html) and with your own data. If you want to get accurate cell type labels for complex tissues, we strongly recommend using more powerful models, like `gpt-4o`, `gpt-4.1`, etc, or reasoning models like `o3-mini`, for which you will have to pay a small fee to OpenAI. As an orientation, running both tutorials with `o3-mini` will cost around 1 USD. Take a look at the [OpenAI API docs](https://platform.openai.com/docs/models) to learn more about the different available models.
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## Data privacy
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docs/notebooks/tutorials/100_heart_atlas.ipynb

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docs/notebooks/tutorials/200_human_bmmcs.ipynb

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