diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 3405d9a..a6e0e67 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -15,7 +15,7 @@ repos: hooks: - id: pyproject-fmt - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.11.2 + rev: v0.11.4 hooks: - id: ruff types_or: [python, pyi, jupyter] diff --git a/CHANGELOG.md b/CHANGELOG.md index dcba88d..ea5fedb 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -17,45 +17,45 @@ and this project adheres to [Semantic Versioning][]. Full commit history is avai #### Added -- Use `rapids_singlecell`, `cupy` and `cuml` to accelerate cluster marker computation on GPUs {pr}`37`. -- Add the possibility to softly enforce adherence to expected cell types {pr}`42`. +- Use `rapids_singlecell`, `cupy` and `cuml` to accelerate cluster marker computation on GPUs {pr}`37`. +- Add the possibility to softly enforce adherence to expected cell types {pr}`42`. #### Changed -- Run cluster label harmonization also for a single sample {pr}`37`. -- Re-format prompts into a dataclass {pr}`42`. +- Run cluster label harmonization also for a single sample {pr}`37`. +- Re-format prompts into a dataclass {pr}`42`. #### Fixed -- Fixed a bug with integer sample labels {pr}`37`. +- Fixed a bug with integer sample labels {pr}`37`. ### 0.1.3 (2025-02-07) #### Added -- Added tests for the single-sample case {pr}`29`. -- Refer to issues and PRs with sphinx {pr}`30`. +- Added tests for the single-sample case {pr}`29`. +- Refer to issues and PRs with sphinx {pr}`30`. #### Removed -- Removed `tenacity` for query retries {pr}`28`. +- Removed `tenacity` for query retries {pr}`28`. #### Fixed -- Fixed `_get_annotation_summary_string` for the single-sample case {pr}`29`. -- Fixed the expected cell type marker test by adding additional marker genes {pr}`28`. +- Fixed `_get_annotation_summary_string` for the single-sample case {pr}`29`. +- Fixed the expected cell type marker test by adding additional marker genes {pr}`28`. ### 0.1.2 (2025-01-29) #### Added -- Update the documentation, in particular the installation instructions. +- Update the documentation, in particular the installation instructions. ### 0.1.1 (2025-01-29) #### Added -- Initial push to PyPI +- Initial push to PyPI ### 0.1.0 (2025-01-29)