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localG_perm()
lists three different p-values and it's not entirely clear which are which. My understanding is the following:
- Pr(z != E(Gi)): "standard" p-value under the assumption of normality
- Pr(z != E(Gi)) Sim: "standard" p-value using bootstrap simulation
- Pr(folded) Sim: conditional permutation that counts extremes on either tail
Can you confirm how each p-value is calculated? I'm happy to make a PR based on informal clarification here. Additionally, it may be worth having a single Rd
file for p-values that these various LISA stats can point to.
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