Skip to content

About "download_panel"  #222

@SuqinYang

Description

@SuqinYang

Hi, I met the following error when running python3 -m hatchet run hatchet.ini
The step "download_panel" requires that the variable "refpaneldir" indicates the directory in which to store the reference panel.

Looks like I didn't download 1000GP_Phase3 file. Then I ran the following code: python3 -m hatchet run hatchet_new.ini with the hatchet_new.ini.
The download_panel part of hatchet_new.ini:
[download_panel]
ref_panel = 1000GP_Phase3
refpaneldir =./

But it's downloading too slowly, I wonder if there is any other way to download this file? What does the full files look like after downloading? And how to write it in hatchet.ini file after downloading, can you give me an example? Thank you so much!

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions