AssertionError [W::tbx_parse1] Coordinate <= 0 detected. Did you forget to use the -0 option?

[immuneAI]

Helllo,

I'm facing this error with new version 2.1.0?, I'm analysing tumour WGS, job failed after 9hrs running with 48 cores. It would be great any help on this!! Many thanks for your support & development!!

[simozacca]

Hi, we have encountered a similar problem and it might be an unsupported version of hstlib. Could you please try to re-run it in a new environment created with:

conda config --add channels bioconda
conda config --add channels conda-forge
conda config --set channel_priority strict

conda create -n hatchet-test hatchet "bcftools==1.19" "samtools==1.19" "htslib==1.19"

If you can please confirm that this will work for you (the warnings might stay but everything should work fine), I will then fix these versions statically. Thank you!