oncoanalyser/modules.json at master · rhassaine/oncoanalyser · GitHub

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{
    "name": "nf-core/oncoanalyser",
    "homePage": "https://github.com/nf-core/oncoanalyser",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "bwa/index": {
                        "branch": "master",
                        "git_sha": "15a93581f7f81d05c04b828954004a089360ea9b",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/bwa/index/bwa-index.diff"
                    },
                    "bwamem2/index": {
                        "branch": "master",
                        "git_sha": "7081e04c18de9480948d34513a1c1e2d0fa9126d",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/bwamem2/index/bwamem2-index.diff"
                    },
                    "gatk4/markduplicates": {
                        "branch": "master",
                        "git_sha": "c066b820236aa43fce94c7b5353a6e0cccff9910",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/gatk4/markduplicates/gatk4-markduplicates.diff"
                    },
                    "samtools/dict": {
                        "branch": "master",
                        "git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/samtools/dict/samtools-dict.diff"
                    },
                    "samtools/faidx": {
                        "branch": "master",
                        "git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/samtools/faidx/samtools-faidx.diff"
                    },
                    "samtools/sort": {
                        "branch": "master",
                        "git_sha": "b7800db9b069ed505db3f9d91b8c72faea9be17b",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/samtools/sort/samtools-sort.diff"
                    },
                    "star/genomegenerate": {
                        "branch": "master",
                        "git_sha": "a21faa6a3481af92a343a10926f59c189a2c16c9",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/star/genomegenerate/star-genomegenerate.diff"
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "a3fb7351b1fdb2b1de282b765816bbea190e86a8",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "fdc08b8b1ae74f56686ce21f7ea11ad11990ce57",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}