test.vcf

##fileformat=VCFv4.1
##command=GangSTR-1.0 --bam tests/test.sorted.bam --ref /storage/resources/dbase/human/hg19/Homo_sapiens_assembly19.fasta --regions test.bed --out test
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FORMAT=<ID=GB,Number=1,Type=String,Description="Genotype given in bp difference from reference">
##FORMAT=<ID=CI,Number=1,Type=String,Description="Confidence intervals">
##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding">
##FORMAT=<ID=Q,Number=1,Type=Float,Description="Min. negative likelihood">
##FORMAT=<ID=INS,Number=1,Type=String,Description="Insert size mean and stddev">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample
3	63898362	.	cagcagcagcagcagcagcagcagcagcag	cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag,cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag	.	.	END=63898391;RU=cag;REF=10	GT:DP:GB:CI:RC:Q:INS	1/2:189:20,74:20-20,69-81:14,72,40,63:928.626:502.433,48.6752