Deploying to gh-pages from @ 79e9e5a 🚀

Author: jayhesselberth

articles/heatmap.html

@@ -291,7 +291,7 @@ black and white for contrast.
 # Add the reference base at each position for labeling
 ref_seqs <- Biostrings::readDNAStringSet(trna_fasta)
 ref_bases <- tibble::tibble(
-  ref = rep(names(ref_seqs), Biostrings::width(ref_seqs)),
+  ref = sub("^host-", "", rep(names(ref_seqs), Biostrings::width(ref_seqs))),
   pos = unlist(lapply(Biostrings::width(ref_seqs), seq_len)),
   ref_base = strsplit(as.character(unlist(ref_seqs)), "") |> unlist()
 )

articles/heatmap.md

@@ -6,7 +6,7 @@ articles:
   articles/heatmap: heatmap.html
   articles/rewiring: rewiring.html
   articles/structure: structure.html
-last_built: 2026-02-27T14:35Z
+last_built: 2026-02-28T00:23Z
 urls:
   reference: https://rnabioco.github.io/clover/reference
   article: https://rnabioco.github.io/clover/articles