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Add logo and graphical abstract images, update README
Replace Google Drive logo URL with GitHub raw URL and add graphical abstract image to the README. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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README.md

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# gretapy - Evaluation and analysis of Gene Regulatory Networks (GRNs)
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<img src="https://drive.google.com/uc?id=1DFGeAuSp8w1kDlMaS4zyeXfepKVW14Ym" align="right" width="120" class="no-scaled-link" alt='GRETA logo' />
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<img src="https://raw.githubusercontent.com/saezlab/gretapy/refs/heads/main/docs/_static/images/logo.png" align="right" width="120" class="no-scaled-link" alt='GRETA logo' />
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[![Tests][badge-tests]][tests]
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[![Documentation][badge-docs]][documentation]
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`gretapy` is a comprehensive framework for benchmarking and evaluating gene regulatory networks (GRNs) inferred from single-cell multiome (RNA+ATAC) data. It provides a systematic evaluation across four complementary dimensions: prior knowledge validation (TF markers, known TF-TF interactions, reference networks), genomic annotations (TF binding sites, cis-regulatory elements, chromatin-gene links), predictive performance (pathway enrichment, expression correlation), and mechanistic validation (perturbation forecasting, Boolean network simulations). The package includes built-in GRN inference methods, curated benchmark datasets, and visualization tools to facilitate rigorous comparison of network inference approaches.
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<img src="https://raw.githubusercontent.com/saezlab/gretapy/refs/heads/main/docs/_static/images/gabstract" align="center" width="120" alt='GRETA graphical abstract' />
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## Getting started
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Please refer to the [documentation][],

docs/_static/images/gabstract.png

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