Update resources

weaglesBio · weaglesBio · commit a2ff5a8ea6d2 · 2025-08-26T13:54:47.000+01:00
diff --git a/conf/base.config b/conf/base.config
@@ -169,8 +169,8 @@ process {
         time   = { 1.h  * ( reference.size() < 1e9 ? 10 : reference.size() < 10e9 ? 30 : 48) }
     }
 
-    withName: '.*:.*:READ_COVERAGE:BEDTOOLS_GENOMECOV' {
-        memory = { 6.GB * (task.attempt * task.attempt) }
+    withName: BEDTOOLS_GENOMECOV {
+        memory = { 8.GB * (task.attempt * task.attempt) }
         time   = { 12.h * task.attempt }
     }
 
@@ -347,7 +347,7 @@ process {
     }
 
     withName: BEDTOOLS_INTERSECT {
-        memory  = { 6.GB * (task.attempt * task.attempt) }
+        memory  = { 8.GB * (task.attempt * task.attempt) }
     }
 
     withName: GENERATE_CRAM_CSV {

Original file line number	Diff line number	Diff line change
`@@ -169,8 +169,8 @@ process {`
`169`	`169`	`time = { 1.h * ( reference.size() < 1e9 ? 10 : reference.size() < 10e9 ? 30 : 48) }`
`170`	`170`	`}`
`171`	`171`
`172`		`- withName: '.:.:READ_COVERAGE:BEDTOOLS_GENOMECOV' {`
`173`		`- memory = { 6.GB * (task.attempt * task.attempt) }`
	`172`	`+ withName: BEDTOOLS_GENOMECOV {`
	`173`	`+ memory = { 8.GB * (task.attempt * task.attempt) }`
`174`	`174`	`time = { 12.h * task.attempt }`
`175`	`175`	`}`
`176`	`176`
`@@ -347,7 +347,7 @@ process {`
`347`	`347`	`}`
`348`	`348`
`349`	`349`	`withName: BEDTOOLS_INTERSECT {`
`350`		`- memory = { 6.GB * (task.attempt * task.attempt) }`
	`350`	`+ memory = { 8.GB * (task.attempt * task.attempt) }`
`351`	`351`	`}`
`352`	`352`
`353`	`353`	`withName: GENERATE_CRAM_CSV {`