variantcomposition/.nf-core.yml at dev · sanger-tol/variantcomposition · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
lint:
  files_exist:
    - conf/igenomes.config
    - conf/igenomes_ignored.config
    - conf/igenomes.config
    - conf/igenomes_ignored.config
    - CODE_OF_CONDUCT.md
    - assets/nf-core-variantcomposition_logo_light.png
    - docs/images/nf-core-variantcomposition_logo_light.png
    - docs/images/nf-core-variantcomposition_logo_dark.png
    - .github/ISSUE_TEMPLATE/config.yml
    - .github/workflows/awstest.yml
    - .github/workflows/awsfulltest.yml
  files_unchanged:
    - .github/CONTRIBUTING.md
    - assets/sendmail_template.txt
    - .prettierignore
    - .github/CONTRIBUTING.md
    - assets/sendmail_template.txt
    - .prettierignore
    - CODE_OF_CONDUCT.md
    - assets/nf-core-variantcomposition_logo_light.png
    - docs/images/nf-core-variantcomposition_logo_light.png
    - docs/images/nf-core-variantcomposition_logo_dark.png
    - .github/ISSUE_TEMPLATE/bug_report.yml
    - .github/CONTRIBUTING.md
    - .github/PULL_REQUEST_TEMPLATE.md
    - assets/email_template.txt
    - docs/README.md
    - .github/workflows/linting.yml
    - .gitattributes
  multiqc_config:
    - report_comment
  nextflow_config:
    - manifest.name
    - manifest.homePage
    - validation.help.beforeText
    - validation.help.afterText
    - validation.summary.beforeText
    - validation.summary.afterText
nf_core_version: 3.5.2
repository_type: pipeline
template:
  author: Yunjia Zhang
  description: Analyse variant composition
  force: false
  is_nfcore: false
  name: variantcomposition
  org: sanger-tol
  outdir: .
  skip_features:
    - igenomes
    - fastqc
    - adaptivecard
  version: 1.0.0dev