Merge pull request #55 from sapporo-wes/feat/snakemake-extra-docker-args #433
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| name: pytest | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - "sapporo/**" | |
| - "tests/**" | |
| - "pyproject.toml" | |
| workflow_dispatch: {} | |
| pull_request: | |
| types: | |
| - opened | |
| - synchronize | |
| jobs: | |
| unit-test: | |
| runs-on: ubuntu-24.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12", "3.13"] | |
| steps: | |
| - name: Checkout Code | |
| uses: actions/checkout@v6 | |
| - name: Setup uv | |
| uses: astral-sh/setup-uv@v7 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Dependencies | |
| run: uv sync --all-extras | |
| - name: Run pytest | |
| run: uv run pytest -v --tb=short | |
| mutation-test: | |
| if: github.event_name == 'workflow_dispatch' | |
| runs-on: ubuntu-24.04 | |
| steps: | |
| - name: Checkout Code | |
| uses: actions/checkout@v6 | |
| with: | |
| fetch-depth: 0 | |
| - name: Setup uv | |
| uses: astral-sh/setup-uv@v7 | |
| with: | |
| python-version: "3.12" | |
| - name: Install Dependencies | |
| run: uv sync --locked --all-extras | |
| - name: Run mutmut | |
| run: uv run mutmut run | |
| - name: Show mutmut results | |
| if: always() | |
| run: uv run mutmut results |