Update GetAssayData call in RunALRA.Seurat to use layer param #276
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: [push, pull_request] | |
| jobs: | |
| test-vignettes: | |
| name: Test any changes to vignettes | |
| runs-on: ubuntu-latest | |
| container: | |
| image: satijalab/seurat-wrappers:latest | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set R repo | |
| run: echo 'options(repos = "https://cloud.r-project.org")' > ~/.Rprofile | |
| - name: Install SeuratWrappers | |
| run: devtools::install(upgrade = FALSE) | |
| shell: Rscript {0} | |
| - name: Test Vignettes | |
| run: bash test-vignettes.sh | |
| - name: Upload files | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: test-build | |
| path: test-build |