I have run into issues with lazy loading of the program. No matter whether Im trying with remotes or devtools i still run into the same issue. I have manually ensured dependencies were installed, this is just the latest iteration of running it. I have also tried running it without my PAT and it hasnt worked. I have R.utils installed and there are no further error messages the program is giving. Ive also tried running it in a fresh directory (which is what the following code was run with) to ensure there were no conflicting packages. please help!
`
remotes::install_github("satijalab/seurat-wrappers", upgrade = "never")
Using GitHub PAT from the git credential store.
Downloading GitHub repo satijalab/seurat-wrappers@HEAD
Running R CMD build...
- checking for file 'C:\Users\happy\AppData\Local\Temp\RtmpOEUrvp\remotes598c710fa9b\satijalab-seurat-wrappers-a1eb0d8/DESCRIPTION' ... OK
- preparing 'SeuratWrappers':
- checking DESCRIPTION meta-information ... OK
- checking for LF line-endings in source and make files and shell scripts
- checking for empty or unneeded directories
Omitted 'LazyData' from DESCRIPTION
- building 'SeuratWrappers_0.4.0.tar.gz'
Installing package into ‘C:/Users/happy/Documents/new_lib’
(as ‘lib’ is unspecified)
- installing source package 'SeuratWrappers' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
ERROR: lazy loading failed for package 'SeuratWrappers'
- removing 'C:/Users/happy/Documents/new_lib/SeuratWrappers'*
Warning message:
In i.p(...) :
installation of package ‘C:/Users/happy/AppData/Local/Temp/RtmpOEUrvp/file598c2c7046a3/SeuratWrappers_0.4.0.tar.gz’ had non-zero exit status
sessionInfo()
R version 4.4.2 (2024-10-31 ucrt)
Platform: x86_64-w64-mingw32/x64
Running under: Windows 11 x64 (build 26100)
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.utf8 LC_CTYPE=English_United States.utf8 LC_MONETARY=English_United States.utf8
[4] LC_NUMERIC=C LC_TIME=English_United States.utf8
time zone: America/New_York
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] R6_2.5.1 tidyselect_1.2.1 xfun_0.50 magrittr_2.0.3 thematic_0.1.6 gtable_0.3.6 remotes_2.5.0
[8] glue_1.8.0 tibble_3.2.1 knitr_1.49 pkgconfig_2.0.3 generics_0.1.3 dplyr_1.1.4 lifecycle_1.0.4
[15] ggplot2_3.5.1 cli_3.6.3 scales_1.3.0 vctrs_0.6.5 grid_4.4.2 compiler_4.4.2 rstudioapi_0.17.1
[22] tools_4.4.2 curl_6.2.0 pillar_1.10.1 evaluate_1.0.3 munsell_0.5.1 colorspace_2.1-1 rlang_1.1.5
`
I have run into issues with lazy loading of the program. No matter whether Im trying with remotes or devtools i still run into the same issue. I have manually ensured dependencies were installed, this is just the latest iteration of running it. I have also tried running it without my PAT and it hasnt worked. I have R.utils installed and there are no further error messages the program is giving. Ive also tried running it in a fresh directory (which is what the following code was run with) to ensure there were no conflicting packages. please help!
`
remotes::install_github("satijalab/seurat-wrappers", upgrade = "never")
Using GitHub PAT from the git credential store.
Downloading GitHub repo satijalab/seurat-wrappers@HEAD
Running
R CMD build...Omitted 'LazyData' from DESCRIPTION
Installing package into ‘C:/Users/happy/Documents/new_lib’
(as ‘lib’ is unspecified)
** using staged installation
** R
** byte-compile and prepare package for lazy loading
ERROR: lazy loading failed for package 'SeuratWrappers'
Warning message:
In i.p(...) :
installation of package ‘C:/Users/happy/AppData/Local/Temp/RtmpOEUrvp/file598c2c7046a3/SeuratWrappers_0.4.0.tar.gz’ had non-zero exit status
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.utf8 LC_CTYPE=English_United States.utf8 LC_MONETARY=English_United States.utf8
[4] LC_NUMERIC=C LC_TIME=English_United States.utf8
time zone: America/New_York
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] R6_2.5.1 tidyselect_1.2.1 xfun_0.50 magrittr_2.0.3 thematic_0.1.6 gtable_0.3.6 remotes_2.5.0
[8] glue_1.8.0 tibble_3.2.1 knitr_1.49 pkgconfig_2.0.3 generics_0.1.3 dplyr_1.1.4 lifecycle_1.0.4
[15] ggplot2_3.5.1 cli_3.6.3 scales_1.3.0 vctrs_0.6.5 grid_4.4.2 compiler_4.4.2 rstudioapi_0.17.1
[22] tools_4.4.2 curl_6.2.0 pillar_1.10.1 evaluate_1.0.3 munsell_0.5.1 colorspace_2.1-1 rlang_1.1.5
`