ci: fix docs workflow (#1419)

* fix docs workflow

* fix uv extra syntax.

* fix numfocus badge

Author: janfb

.github/workflows/build_docs.yml

@@ -26,7 +26,7 @@ jobs:
         cache-dependency-glob: "pyproject.toml"
 
     - name: Install dependencies with uv
-      run: uv sync --all-extras --doc
+      run: uv sync --extra doc
 
     - name: strip output except plots and prints from tutorial notebooks
       run: |

.github/workflows/cd.yml

@@ -37,7 +37,7 @@ jobs:
         cache-dependency-glob: "pyproject.toml"
 
     - name: Install dependencies with uv
-      run: uv sync --all-extras --dev
+      run: uv sync --extra dev
 
     - name: Run the fast and the slow CPU tests with coverage
       run: uv run pytest -v -x -n auto -m "not gpu" --cov=sbi --cov-report=xml tests/

.github/workflows/lint.yml

@@ -45,7 +45,7 @@ jobs:
           cache-dependency-glob: "pyproject.toml"
 
       - name: Install dependencies with uv
-        run: uv sync --all-extras --dev
+        run: uv sync --extra dev
 
       - name: Check types with pyright
         run: uv run pyright sbi

.github/workflows/manual_test.yml

@@ -29,8 +29,8 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        python-version: ['3.8']
-        torch-version: ['1.11', '2.2']
+        python-version: ['3.10']
+        torch-version: ['1.13', '2.5']
 
     steps:
     - name: Checkout
@@ -39,27 +39,18 @@ jobs:
         fetch-depth: 0
         lfs: false
 
-    - name: Set up Python
-      uses: actions/setup-python@v5
+    - name: Install uv and set the python version
+      uses: astral-sh/setup-uv@v5
       with:
         python-version: ${{ matrix.python-version }}
+        enable-cache: true
+        cache-dependency-glob: "pyproject.toml"
 
-    - name: Cache dependency
-      id: cache-dependencies
-      uses: actions/cache@v4
-      with:
-        path: ~/.cache/pip
-        key: ${{ runner.os }}-pip-${{ matrix.python-version }}-${{ matrix.torch-version }}$
-        restore-keys: |
-          ${{ runner.os }}-pip-${{ matrix.python-version }}-
-          ${{ runner.os }}-pip-
-
-    - name: Install dependencies
+    - name: Install dependencies with uv
       run: |
-        python -m pip install --upgrade pip
-        pip install torch==${{ matrix.torch-version }} --extra-index-url https://download.pytorch.org/whl/cpu
-        pip install -e .[dev]
+        uv pip install torch==${{ matrix.torch-version }} --extra-index-url https://download.pytorch.org/whl/cpu
+        uv pip install -e .[dev]
 
     - name: Run the selected tests without coverage
       run: |
-        pytest -v -x -m ${{ inputs.pytest-marker }} tests/
+        uv run pytest -v -x -m ${{ inputs.pytest-marker }} tests/

README.md

@@ -5,7 +5,7 @@
 [![codecov](https://codecov.io/gh/sbi-dev/sbi/branch/main/graph/badge.svg)](https://codecov.io/gh/sbi-dev/sbi)
 [![GitHub license](https://img.shields.io/github/license/sbi-dev/sbi)](https://github.com/sbi-dev/sbi/blob/master/LICENSE.txt)
 [![DOI](https://joss.theoj.org/papers/10.21105/joss.02505/status.svg)](https://doi.org/10.21105/joss.02505)
-[![NumFOCUS affiliated](https://camo.githubusercontent.com/a0f197cee66ccd8ed498cf64e9f3f384c78a072fe1e65bada8d3015356ac7599/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f4e756d464f4355532d616666696c696174656425323070726f6a6563742d6f72616e67652e7376673f7374796c653d666c617426636f6c6f72413d45313532334426636f6c6f72423d303037443841)]
+[![NumFOCUS affiliated](https://camo.githubusercontent.com/a0f197cee66ccd8ed498cf64e9f3f384c78a072fe1e65bada8d3015356ac7599/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f4e756d464f4355532d616666696c696174656425323070726f6a6563742d6f72616e67652e7376673f7374796c653d666c617426636f6c6f72413d45313532334426636f6c6f72423d303037443841)](https://numfocus.org/sponsored-projects/affiliated-projects)
 
 ## `sbi`: Simulation-Based Inference