repeated Measure ANOVA with two independant group in LIMO #36
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| name: Claude Code | |
| on: | |
| issue_comment: | |
| types: [created] | |
| pull_request_review_comment: | |
| types: [created] | |
| issues: | |
| types: [opened, assigned] | |
| pull_request_review: | |
| types: [submitted] | |
| jobs: | |
| claude: | |
| if: | | |
| (github.event_name == 'issue_comment' && | |
| (github.event.comment.author_association == 'OWNER' || | |
| github.event.comment.author_association == 'MEMBER' || | |
| github.event.comment.author_association == 'COLLABORATOR') && | |
| contains(github.event.comment.body, '@claude')) || | |
| (github.event_name == 'pull_request_review_comment' && | |
| (github.event.comment.author_association == 'OWNER' || | |
| github.event.comment.author_association == 'MEMBER' || | |
| github.event.comment.author_association == 'COLLABORATOR') && | |
| contains(github.event.comment.body, '@claude')) || | |
| (github.event_name == 'pull_request_review' && | |
| (github.event.review.author_association == 'OWNER' || | |
| github.event.review.author_association == 'MEMBER' || | |
| github.event.review.author_association == 'COLLABORATOR') && | |
| contains(github.event.review.body, '@claude')) || | |
| (github.event_name == 'issues' && | |
| (github.event.issue.author_association == 'OWNER' || | |
| github.event.issue.author_association == 'MEMBER' || | |
| github.event.issue.author_association == 'COLLABORATOR') && | |
| (contains(github.event.issue.body, '@claude') || contains(github.event.issue.title, '@claude'))) | |
| timeout-minutes: 45 | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| issues: write | |
| id-token: write | |
| actions: read | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: recursive | |
| - name: Install Octave | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y octave | |
| - name: Run Claude Code | |
| uses: anthropics/claude-code-action@v1 | |
| with: | |
| claude_code_oauth_token: ${{ secrets.CLAUDE_CODE_OAUTH_TOKEN || secrets.CLAUDE_MAX_OAUTH_TOKEN }} | |
| allowed_bots: 'claude[bot]' | |
| additional_permissions: | | |
| actions: read | |
| claude_args: | | |
| --model claude-opus-4-7 | |
| --max-turns 250 | |
| --allowedTools "Bash(git:*),Bash(gh:*),Bash(matlab:*),Bash(octave:*),Bash(find:*),Bash(rg:*),Bash(sed:*),Bash(ls:*),Bash(pwd:*),Bash(cat:*)" | |
| --system-prompt "Always read and follow AGENTS.md before starting work. Keep changes small, MATLAB-native, and consistent with existing EEGLAB helpers. You can commit and push changes. Before submitting changes, run the narrowest relevant MATLAB or Octave validation command; report exactly what passed or failed. Always commit and push changes, even if validation cannot run or fails." | |
| triage: | |
| if: | | |
| github.event_name == 'issues' && | |
| github.event.action == 'opened' && | |
| (github.event.issue.author_association == 'OWNER' || | |
| github.event.issue.author_association == 'MEMBER' || | |
| github.event.issue.author_association == 'COLLABORATOR') && | |
| !contains(github.event.issue.body, '@claude') && | |
| !contains(github.event.issue.title, '@claude') | |
| timeout-minutes: 60 | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| issues: write | |
| id-token: write | |
| actions: read | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: recursive | |
| - name: Install Octave | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y octave | |
| - name: Triage Issue | |
| uses: anthropics/claude-code-action@v1 | |
| with: | |
| claude_code_oauth_token: ${{ secrets.CLAUDE_CODE_OAUTH_TOKEN || secrets.CLAUDE_MAX_OAUTH_TOKEN }} | |
| allowed_bots: 'claude[bot]' | |
| additional_permissions: | | |
| actions: read | |
| prompt: | | |
| Read AGENTS.md, .agents/skills/fix-issue/SKILL.md, and .agents/skills/pull-request/SKILL.md. | |
| Then analyze issue #${{ github.event.issue.number }}. | |
| Before doing anything else, decide whether the issue is actionable. | |
| An actionable issue states what is broken or requested in concrete | |
| terms, names the affected area or workflow, and gives enough detail | |
| to reproduce or identify the relevant source. If it is vague, post | |
| one comment listing the exact missing details and stop. | |
| Use a single issue comment for progress. Post it once, then use | |
| gh issue comment --edit-last for updates. | |
| For small, self-contained bug fixes under about 100 changed lines, | |
| follow the fix-issue workflow and open a PR. For larger changes, | |
| new features, design questions, GUI redesigns, plugin architecture, | |
| or anything with unclear acceptance criteria, do not open a PR. | |
| Instead, update the issue with root-cause analysis, relevant code | |
| references, and a proposed approach for maintainer review. | |
| Always produce output: a PR for a small actionable fix, or an | |
| analysis comment explaining what is needed next. | |
| claude_args: | | |
| --model claude-opus-4-7 | |
| --max-turns 250 | |
| --permission-mode acceptEdits | |
| --allowedTools "Bash(git:*),Bash(gh:*),Bash(matlab:*),Bash(octave:*),Bash(find:*),Bash(rg:*),Bash(sed:*),Bash(ls:*),Bash(pwd:*),Bash(cat:*)" | |
| --system-prompt "You can commit and push changes. Use MATLAB or Octave validation when possible. Keep EEGLAB changes small and aligned with existing MATLAB helpers. Never post multiple progress comments; post one comment, then use --edit-last for all updates." | |
| autofix: | |
| if: | | |
| github.event_name == 'pull_request_review' && | |
| (github.event.review.author_association == 'OWNER' || | |
| github.event.review.author_association == 'MEMBER' || | |
| github.event.review.author_association == 'COLLABORATOR') && | |
| contains(github.event.review.body, 'autofix') && | |
| !contains(github.event.review.body, '@claude') | |
| timeout-minutes: 45 | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| issues: write | |
| id-token: write | |
| actions: read | |
| steps: | |
| - name: Checkout PR branch | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: recursive | |
| ref: ${{ github.event.pull_request.head.ref }} | |
| - name: Install Octave | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y octave | |
| - name: Apply Autofix | |
| uses: anthropics/claude-code-action@v1 | |
| with: | |
| claude_code_oauth_token: ${{ secrets.CLAUDE_CODE_OAUTH_TOKEN || secrets.CLAUDE_MAX_OAUTH_TOKEN }} | |
| allowed_bots: 'claude[bot]' | |
| prompt: | | |
| PR: #${{ github.event.pull_request.number }} | |
| REVIEW: ${{ github.event.review.body }} | |
| A maintainer requested autofix. Read AGENTS.md. | |
| 1. Fetch the full review with inline comments. | |
| 2. Apply all actionable review comments to the PR branch. | |
| 3. Keep changes small and consistent with EEGLAB MATLAB conventions. | |
| 4. Run relevant MATLAB or Octave validation. | |
| 5. Commit and push changes to the PR branch. | |
| 6. Post a comment summarizing what changed and what validation ran, prefixed with "Autofix:". | |
| claude_args: | | |
| --model claude-opus-4-7 | |
| --max-turns 150 | |
| --allowedTools "Bash(git:*),Bash(gh:*),Bash(matlab:*),Bash(octave:*),Bash(find:*),Bash(rg:*),Bash(sed:*),Bash(ls:*),Bash(pwd:*),Bash(cat:*)" |