Replace MeshConverter with Kotlin version, add option to flip vertex winding order

Author: skalarproduktraum

src/main/java/sc/iview/commands/demo/BDVSlicingDemo.java

@@ -28,34 +28,23 @@
  */
 package sc.iview.commands.demo;
 
-import bdv.BigDataViewer;
-import bdv.tools.brightness.ConverterSetup;
 import bdv.util.*;
 import bdv.viewer.SourceAndConverter;
-import graphics.scenery.Node;
 import graphics.scenery.volumes.Volume;
 import io.scif.services.DatasetIOService;
 import net.imagej.Dataset;
-import net.imagej.mesh.Mesh;
 import net.imagej.ops.OpService;
-import net.imagej.ops.geom.geom3d.mesh.BitTypeVertexInterpolator;
-import net.imglib2.display.ColorConverter;
-import net.imglib2.img.Img;
-import net.imglib2.type.logic.BitType;
 import net.imglib2.type.numeric.integer.UnsignedByteType;
-import org.joml.Vector3f;
 import org.scijava.command.Command;
 import org.scijava.command.CommandService;
 import org.scijava.log.LogService;
 import org.scijava.plugin.Menu;
 import org.scijava.plugin.Parameter;
 import org.scijava.plugin.Plugin;
 import sc.iview.SciView;
-import sc.iview.process.MeshConverter;
 
 import java.io.File;
 import java.io.IOException;
-import java.util.ArrayList;
 import java.util.HashMap;
 import java.util.List;
 

src/main/java/sc/iview/commands/demo/GameOfLife3D.java

@@ -103,17 +103,17 @@ public class GameOfLife3D implements Command {
 //    @Parameter(label = "Play speed", min = "1", max="100", style = NumberWidget.SCROLL_BAR_STYLE, persist = false)
     private int playSpeed = 10;
 //
-//    @Parameter(callback = "iterate")
-//    private Button iterate;
-//
-//    @Parameter(callback = "randomize")
-//    private Button randomize;
-//
-//    @Parameter(callback = "play")
-//    private Button play;
-//
-//    @Parameter(callback = "pause")
-//    private Button pause;
+    @Parameter(callback = "iterate")
+    private Button iterate;
+
+    @Parameter(callback = "randomize")
+    private Button randomize;
+
+    @Parameter(callback = "play")
+    private Button play;
+
+    @Parameter(callback = "pause")
+    private Button pause;
 
     private int w = 64, h = 64, d = 64;
     private Img<UnsignedByteType> field;

src/main/java/sc/iview/commands/demo/ShowSegmentationDemo.java

@@ -33,7 +33,6 @@
 import net.imagej.mesh.Mesh;
 import net.imagej.mesh.Meshes;
 import net.imagej.ops.OpService;
-import net.imagej.ops.geom.geom3d.mesh.BitTypeVertexInterpolator;
 import net.imglib2.Cursor;
 import net.imglib2.RandomAccessibleInterval;
 import net.imglib2.RealPoint;

src/main/java/sc/iview/commands/demo/VolumeRenderDemo.java

@@ -28,7 +28,6 @@
  */
 package sc.iview.commands.demo;
 
-import graphics.scenery.Node;
 import graphics.scenery.volumes.Volume;
 import io.scif.services.DatasetIOService;
 import net.imagej.Dataset;
@@ -38,7 +37,6 @@
 import net.imglib2.img.Img;
 import net.imglib2.type.logic.BitType;
 import net.imglib2.type.numeric.integer.UnsignedByteType;
-import org.joml.Vector3f;
 import org.scijava.command.Command;
 import org.scijava.command.CommandService;
 import org.scijava.log.LogService;

src/main/java/sc/iview/commands/file/ExportN5.java

@@ -29,8 +29,6 @@
 package sc.iview.commands.file;
 
 import graphics.scenery.Mesh;
-import graphics.scenery.Node;
-import org.janelia.saalfeldlab.n5.N5FSReader;
 import org.janelia.saalfeldlab.n5.N5FSWriter;
 import org.janelia.saalfeldlab.n5.N5Writer;
 import org.scijava.command.Command;

src/main/java/sc/iview/commands/process/ConvexHull.java

@@ -41,9 +41,9 @@
 import org.scijava.plugin.Plugin;
 
 import sc.iview.SciView;
-import sc.iview.process.MeshConverter;
 
 import graphics.scenery.Mesh;
+import sc.iview.process.MeshConverter;
 
 /**
  * Command to create a convex hull of the currently open mesh

src/main/java/sc/iview/commands/process/MeshToImage.java

@@ -43,9 +43,9 @@
 import org.scijava.plugin.Plugin;
 
 import sc.iview.SciView;
-import sc.iview.process.MeshConverter;
 
 import graphics.scenery.Mesh;
+import sc.iview.process.MeshConverter;
 
 /**
  * Command to voxelize the currently active Mesh into an image.

src/main/java/sc/iview/io/N5IO.java

@@ -43,7 +43,6 @@
 import org.scijava.io.AbstractIOPlugin;
 import org.scijava.io.IOPlugin;
 import org.scijava.plugin.Plugin;
-import org.scijava.util.FileUtils;
 import sc.iview.SciView;
 import sc.iview.SciViewService;
 import sc.iview.process.MeshConverter;