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Remove bundle diameter from tuto
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docs/source/documentation/bundle_analysis/bundle_diameter_fitting_function.rst

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docs/source/documentation/bundle_analysis/index.rst

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@@ -7,7 +7,6 @@ This section covers bundle analysis methods in scilpy.
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:maxdepth: 1
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tractogram_segmentation
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bundle_diameter_fitting_function
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profilometry
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tractometry
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create_population_template

src/scilpy/cli/scil_bundle_diameter.py

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- or if fanning is in 2 directions (uniform dispersion), leads to a good
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approximation
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Fitting func
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------------
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Choices are:
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- None: Default, all points are weighted equally no matter their
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(normalized 0-1) distance to the barycenter.
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- lin_up: Points are weighted using their distance to the barycenter
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(linear, x). Farther = increased weight. Bigger envelope.
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- lin_down: Points are weighted using their distance to the barycenter
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(linear, 1-x). Farther = decreased weight. Smaller envelope.
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- exp: Points are weighted using their distance to the barycenter
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(exponential, e^x). Farther = decreased weight. Smaller envelope.
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- inv: Points are weighted using their distance to the barycenter
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(inverse, 1/x). Farther = decreased weight. Much smaller envelope.
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- log: Points are weighted using their distance to the barycenter
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(logarithmic, ln x+1). Farther = increased weight. Bigger envelope.
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The scripts prints a JSON file with mean/std. This is compatible with our
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tractometry scripts.
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WARNING: STD is in fact an ERROR measure from the fit and NOT an STD.

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