TODO list for tutorials

[EmmaRenauld]

TODO Tutorials

• General
  • Finish preparing the tutorial data
  • Change all bash script + all webpages to use the tutorial data
• Reconst
  • In visu, add a description of how to view fODFs. Add a link to that page on each reconst script that produces fODF with a picture of the results on each page.
• Tracking
  • Local tracking with dipy not prepared
    • https://scilpy.readthedocs.io/en/latest/documentation/tracking/local_tracking.html
  • Dev tracking not prepared
    • https://scilpy.readthedocs.io/en/latest/documentation/tracking/dev_tracking.html
  • Fibertube,
    • Broken images. Not sure who they belonged to.
    • Create a bash?
    • https://scilpy.readthedocs.io/en/latest/documentation/tracking/fibertube_tracking.html
• Tractograms
  • Tractogram registration
    • Create a bash
    • Add more bla bla
    • Add images
• Bundle segmentation and analysis
  • Bundle segmentation
    • Nothing done! https://scilpy.readthedocs.io/en/latest/documentation/bundle_analysis/tractogram_segmentation.html
  • Profilometry
    • Add command lines? https://scilpy.readthedocs.io/en/latest/documentation/bundle_analysis/profilometry.html
  • Tractometry
    • Nearly nothing there! https://scilpy.readthedocs.io/en/latest/documentation/bundle_analysis/tractometry.html
• Connectivity
  • Connectivity
    • Add command lines