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Update papers/scipy-2025-Deborah_Khider/main.md
Co-authored-by: Kurt McKee <contactme@kurtmckee.org>
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papers/scipy-2025-Deborah_Khider/main.md

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@@ -35,7 +35,7 @@ The third module, *Timeseries Analysis*, introduces key concepts and practicums
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The fourth module, *The Scientific Paper of The Future*, introduces concepts in FAIR scientific publishing. As its name indicates, this module presents an updated version [@KhiderGPF] of the Geoscience Paper of the Future (GPF) [@doi:10.1002/2015EA000136]. The GPF represented one of the earliest community efforts to fully document, share, and cite all research products, including data, software, and computational provenance (i.e., describing the workflow used in a study, which links together data and software with their associated parameter values for reproducibility). Although the GPF was published before the FAIR principles [@doi:10.1038/sdata.2016.18; @doi:10.3233/DS-190026; @doi:10.1162/dint_a_00033], the guidelines outlined in this paper allow for compliance with FAIR. The updated materials reflect this compliance and provide additional guidance on the technologies such as Binder [@binder] that support FAIR, open and reproducible science. Learners on the platform are able to test their understanding of these concepts using a multiple choice quiz (@fig:quiz).
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The fifth module, *Using GitHub for Your Research*, focuses on GitHub as a platform to collaborate, share scientific workflow and software, and support project management. The module covers the basics of repositories, forks, pull requests, understanding and setting up actions for automation, and linking a GitHub repository to Zenodo to obtain a persistent identifier. This module provides a high-level overview of GitHub Actions, including their purpose and the basic structure of a workflow file, while more detailed applications—such as containerization and continuous integration—are addressed in the final two modules.Lessons from this chapter were summarized from various sources including the GitHub documentation, blogs from Medium and other sources, and Project Pythia Foundations [@PythiaFoundations].
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The fifth module, *Using GitHub for Your Research*, focuses on GitHub as a platform to collaborate, share scientific workflow and software, and support project management. The module covers the basics of repositories, forks, pull requests, understanding and setting up actions for automation, and linking a GitHub repository to Zenodo to obtain a persistent identifier. This module provides a high-level overview of GitHub Actions, including their purpose and the basic structure of a workflow file, while more detailed applications—such as containerization and continuous integration—are addressed in the final two modules. Lessons from this chapter were summarized from various sources including the GitHub documentation, blogs from Medium and other sources, and Project Pythia Foundations [@PythiaFoundations].
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:::{figure} FROGS - Publishing.png
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:label: fig:quiz

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