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Release 0.7.6 (#549)
* Update release date formatting * Bump scipy version
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docs/release-latest.rst

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.. role:: small
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.. role:: smaller
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On master
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~~~~~~~~~
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0.7.6 :small:`11 April, 2021`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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.. rubric:: New features
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- :func:`anndata.read_loom` arguments `obsm_names` and `varm_names` are now deprecated in favour of `obsm_mapping` and `varm_mapping` :pr:`538` :smaller:`I Virshup`
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0.7.5 :small:`2020-11-12`
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~~~~~~~~~~~~~~~~~~~~~~~~~
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0.7.5 :small:`12 November, 2020`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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.. rubric:: Functionality
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- Allow `adata.raw = None`, as is documented :pr:`447` :smaller:`I Virshup`
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- Fix warnings from pandas 1.1 :pr:`425` :smaller:`I Virshup`
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0.7.4 :small:`2020-07-10`
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0.7.4 :small:`10 July, 2020`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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.. rubric:: Concatenation overhaul :pr:`378` :smaller:`I Virshup`
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- Fixed error from `AnnData.concatenate` by bumping minimum versions of numpy and pandas :issue:`385`
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- Fixed colors being incorrectly changed when `AnnData` object was subset :pr:`388`
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0.7.3 :small:`2020-05-20`
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~~~~~~~~~~~~~~~~~~~~~~~~~
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0.7.3 :small:`20 May, 2020`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~
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.. rubric:: Bug fixes
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- Fixed bug where graphs used too much memory when copying :pr:`381` :smaller:`I Virshup`
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0.7.2 :small:`2020-05-15`
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0.7.2 :small:`15 May, 2020`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~
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.. rubric:: Concatenation overhaul :smaller:`I Virshup`
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docs/release-notes.rst

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.. include:: release-latest.rst
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0.7.0 :small:`2020-01-22`
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0.7.0 :small:`22 January, 2020`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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.. warning::
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Breaking changes introduced between `0.6.22.post1` and `0.7`:
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- iteration over chunks :func:`~anndata.AnnData.chunked_X` and :func:`~anndata.AnnData.chunk_X`
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:noteversion:`0.6.1` :pr:`20` :smaller:`S Rybakov`
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0.6.0 :small:`2018-05-01`
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0.6.0 :small:`1 May, 2018`
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~~~~~~~~~~~~~~~~~~~~~~~~~~
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- compatibility with Seurat converter
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- tremendous speedup for :func:`~anndata.AnnData.concatenate`
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Version 0.5
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-----------
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0.5.0 :small:`2018-02-09`
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0.5.0 :small:`9 February, 2018`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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- inform about duplicates in :class:`~anndata.AnnData.var_names` and resolve them using :func:`~anndata.AnnData.var_names_make_unique`
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- automatically remove unused categories after slicing
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Version 0.4
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-----------
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0.4.0 :small:`2017-12-23`
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0.4.0 :small:`23 December, 2017`
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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- read/write `.loom`_ files
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- scalability beyond dataset sizes that fit into memory: see this `blog post`_

pyproject.toml

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requires = [
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'pandas>=1.1.1', # pandas <1.1.1 has pandas/issues/35446
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'numpy>=1.16.5', # required by pandas 1.x
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'scipy~=1.0',
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'scipy>1.4',
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'h5py',
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'natsort',
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'packaging>=20',

requirements.txt

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# auto-generated from pyproject.toml, DO NOT EDIT
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pandas>=1.1.1
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numpy>=1.16.5
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scipy~=1.0
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scipy>1.4
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h5py
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natsort
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packaging>=20

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