From 42baa7aa668aa122546ef80623f7c40df2b9a70c Mon Sep 17 00:00:00 2001
From: ilan-gold <ilanbassgold@gmail.com>
Date: Mon, 17 Feb 2025 16:51:44 +0100
Subject: [PATCH 1/5] (fix): add `dask` bound for sparse issue

---
 pyproject.toml | 17 ++++++++---------
 1 file changed, 8 insertions(+), 9 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index b4b5ab14c..e53cf28a5 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -5,7 +5,7 @@ requires = ["hatchling", "hatch-vcs"]
 [project]
 name = "anndata"
 description = "Annotated data."
-requires-python = ">=3.10"
+requires-python = ">=3.11"
 license = "BSD-3-Clause"
 authors = [
     { name = "Philipp Angerer" },
@@ -29,21 +29,19 @@ classifiers = [
     "Operating System :: Microsoft :: Windows",
     "Operating System :: POSIX :: Linux",
     "Programming Language :: Python :: 3",
-    "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
     "Topic :: Scientific/Engineering :: Bio-Informatics",
     "Topic :: Scientific/Engineering :: Visualization",
 ]
 dependencies = [
-    # pandas <1.4 has pandas/issues/35446
     # pandas 2.1.0rc0 has pandas/issues/54622
-    "pandas >=1.4, !=2.1.0rc0, !=2.1.2",
-    "numpy>=1.23",
+    "pandas >=2.0.0, !=2.1.0rc0, !=2.1.2",
+    "numpy>=1.25",
     # https://github.com/scverse/anndata/issues/1434
-    "scipy >1.8",
-    "h5py>=3.7",
-    "exceptiongroup; python_version<'3.11'",
+    "scipy >1.11",
+    "h5py>=3.8",
     "natsort",
     "packaging>=24.2",
     # array-api-compat 1.5 has https://github.com/scverse/anndata/issues/1410
@@ -108,7 +106,8 @@ gpu = ["cupy"]
 cu12 = ["cupy-cuda12x"]
 cu11 = ["cupy-cuda11x"]
 # https://github.com/dask/dask/issues/11290
-dask = ["dask[array]>=2022.09.2,!=2024.8.*,!=2024.9.*"]
+# https://github.com/dask/dask/issues/11752
+dask = ["dask[array]>=2023.5.1,!=2024.8.*,!=2024.9.*,<2025.2.0"]
 
 [tool.hatch.version]
 source = "vcs"

From 3adde1a4c0ea3716f2947d217653865cebf6925d Mon Sep 17 00:00:00 2001
From: ilan-gold <ilanbassgold@gmail.com>
Date: Mon, 17 Feb 2025 16:53:13 +0100
Subject: [PATCH 2/5] (chore): relnote

---
 docs/release-notes/1859.bugfix.md | 1 +
 1 file changed, 1 insertion(+)
 create mode 100644 docs/release-notes/1859.bugfix.md

diff --git a/docs/release-notes/1859.bugfix.md b/docs/release-notes/1859.bugfix.md
new file mode 100644
index 000000000..7d62dafce
--- /dev/null
+++ b/docs/release-notes/1859.bugfix.md
@@ -0,0 +1 @@
+Bound {mod}`dask` due to {issue}`dask/dask#11752` {user}`ilan-gold`

From e225caa15483201730c73fd799699e491511e4bc Mon Sep 17 00:00:00 2001
From: ilan-gold <ilanbassgold@gmail.com>
Date: Mon, 17 Feb 2025 16:55:32 +0100
Subject: [PATCH 3/5] (fix): undo scientific python changes

---
 pyproject.toml | 14 ++++++++------
 1 file changed, 8 insertions(+), 6 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index e53cf28a5..e898887d8 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -5,7 +5,7 @@ requires = ["hatchling", "hatch-vcs"]
 [project]
 name = "anndata"
 description = "Annotated data."
-requires-python = ">=3.11"
+requires-python = ">=3.10"
 license = "BSD-3-Clause"
 authors = [
     { name = "Philipp Angerer" },
@@ -29,19 +29,21 @@ classifiers = [
     "Operating System :: Microsoft :: Windows",
     "Operating System :: POSIX :: Linux",
     "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
-    "Programming Language :: Python :: 3.13",
     "Topic :: Scientific/Engineering :: Bio-Informatics",
     "Topic :: Scientific/Engineering :: Visualization",
 ]
 dependencies = [
+    # pandas <1.4 has pandas/issues/35446
     # pandas 2.1.0rc0 has pandas/issues/54622
-    "pandas >=2.0.0, !=2.1.0rc0, !=2.1.2",
-    "numpy>=1.25",
+    "pandas >=1.4, !=2.1.0rc0, !=2.1.2",
+    "numpy>=1.23",
     # https://github.com/scverse/anndata/issues/1434
-    "scipy >1.11",
-    "h5py>=3.8",
+    "scipy >1.8",
+    "h5py>=3.7",
+    "exceptiongroup; python_version<'3.11'",
     "natsort",
     "packaging>=24.2",
     # array-api-compat 1.5 has https://github.com/scverse/anndata/issues/1410

From 021d8f9a9f2bd019e4069b76d80c7b89e3bdbc18 Mon Sep 17 00:00:00 2001
From: ilan-gold <ilanbassgold@gmail.com>
Date: Mon, 17 Feb 2025 17:01:20 +0100
Subject: [PATCH 4/5] (fix): no `mod` dask

---
 docs/release-notes/1859.bugfix.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/release-notes/1859.bugfix.md b/docs/release-notes/1859.bugfix.md
index 7d62dafce..5bdc17112 100644
--- a/docs/release-notes/1859.bugfix.md
+++ b/docs/release-notes/1859.bugfix.md
@@ -1 +1 @@
-Bound {mod}`dask` due to {issue}`dask/dask#11752` {user}`ilan-gold`
+Bound `dask` due to {issue}`dask/dask#11752` {user}`ilan-gold`

From 7f87e9cfb2340f0de4e2990267b2178d7526e6da Mon Sep 17 00:00:00 2001
From: Ilan Gold <ilanbassgold@gmail.com>
Date: Tue, 18 Feb 2025 10:59:15 +0100
Subject: [PATCH 5/5] (fix): remove deprecation schedule schange

---
 pyproject.toml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pyproject.toml b/pyproject.toml
index e898887d8..3ac288a0b 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -109,7 +109,7 @@ cu12 = ["cupy-cuda12x"]
 cu11 = ["cupy-cuda11x"]
 # https://github.com/dask/dask/issues/11290
 # https://github.com/dask/dask/issues/11752
-dask = ["dask[array]>=2023.5.1,!=2024.8.*,!=2024.9.*,<2025.2.0"]
+dask = ["dask[array]>=2022.09.2,!=2024.8.*,!=2024.9.*,<2025.2.0"]
 
 [tool.hatch.version]
 source = "vcs"