Deploying to gh-pages from @ fc5dc5b 🚀

Author: rcannood

articles/anndataR.html

@@ -455,25 +455,25 @@ sessionInfo()
 #> loaded via a namespace (and not attached):
 #>   [1] RColorBrewer_1.1-3     jsonlite_2.0.0         magrittr_2.0.5        
 #>   [4] spatstat.utils_3.2-2   farver_2.1.2           rmarkdown_2.31        
-#>   [7] fs_2.0.1               ragg_1.5.2             vctrs_0.7.3           
+#>   [7] fs_2.1.0               ragg_1.5.2             vctrs_0.7.3           
 #>  [10] ROCR_1.0-12            spatstat.explore_3.8-0 htmltools_0.5.9       
 #>  [13] S4Arrays_1.10.1        Rhdf5lib_1.32.0        SparseArray_1.10.10   
 #>  [16] rhdf5_2.54.1           sass_0.4.10            sctransform_0.4.3     
-#>  [19] parallelly_1.46.1      KernSmooth_2.23-26     bslib_0.10.0          
+#>  [19] parallelly_1.47.0      KernSmooth_2.23-26     bslib_0.10.0          
 #>  [22] htmlwidgets_1.6.4      desc_1.4.3             ica_1.0-3             
 #>  [25] plyr_1.8.9             plotly_4.12.0          zoo_1.8-15            
-#>  [28] cachem_1.1.0           igraph_2.2.3           mime_0.13             
+#>  [28] cachem_1.1.0           igraph_2.3.0           mime_0.13             
 #>  [31] lifecycle_1.0.5        pkgconfig_2.0.3        Matrix_1.7-4          
 #>  [34] R6_2.6.1               fastmap_1.2.0          fitdistrplus_1.2-6    
 #>  [37] future_1.70.0          shiny_1.13.0           digest_0.6.39         
 #>  [40] patchwork_1.3.2        tensor_1.5.1           Seurat_5.4.0          
 #>  [43] RSpectra_0.16-2        irlba_2.3.7            textshaping_1.0.5     
 #>  [46] progressr_0.19.0       spatstat.sparse_3.1-0  polyclip_1.10-7       
 #>  [49] httr_1.4.8             abind_1.4-8            compiler_4.5.3        
-#>  [52] S7_0.2.1               fastDummies_1.7.5      MASS_7.3-65           
+#>  [52] S7_0.2.1-1             fastDummies_1.7.5      MASS_7.3-65           
 #>  [55] DelayedArray_0.36.1    tools_4.5.3            lmtest_0.9-40         
 #>  [58] otel_0.2.0             httpuv_1.6.17          future.apply_1.20.2   
-#>  [61] goftest_1.2-3          glue_1.8.0             nlme_3.1-168          
+#>  [61] goftest_1.2-3          glue_1.8.1             nlme_3.1-168          
 #>  [64] rhdf5filters_1.22.0    promises_1.5.0         grid_4.5.3            
 #>  [67] Rtsne_0.17             cluster_2.1.8.2        reshape2_1.4.5        
 #>  [70] gtable_0.3.6           spatstat.data_3.1-9    tidyr_1.3.2           
@@ -489,7 +489,7 @@ sessionInfo()
 #> [100] evaluate_1.0.5         codetools_0.2-20       tibble_3.3.1          
 #> [103] BiocManager_1.30.27    cli_3.6.6              uwot_0.2.4            
 #> [106] xtable_1.8-8           reticulate_1.46.0      systemfonts_1.3.2     
-#> [109] jquerylib_0.1.4        Rcpp_1.1.1             spatstat.random_3.4-5 
+#> [109] jquerylib_0.1.4        Rcpp_1.1.1-1           spatstat.random_3.4-5 
 #> [112] globals_0.19.1         png_0.1-9              spatstat.univar_3.1-7 
 #> [115] parallel_4.5.3         pkgdown_2.2.0          ggplot2_4.0.2         
 #> [118] dotCall64_1.2          listenv_0.10.1         viridisLite_0.4.3     

articles/anndataR.md

@@ -164,10 +164,10 @@ sessionInfo()
     ## [10] R6_2.6.1            generics_0.1.4      htmlwidgets_1.6.4  
     ## [13] bookdown_0.46       desc_1.4.3          bslib_0.10.0       
     ## [16] pillar_1.11.1       rlang_1.2.0         cachem_1.1.0       
-    ## [19] stringi_1.8.7       xfun_0.57           fs_2.0.1           
+    ## [19] stringi_1.8.7       xfun_0.57           fs_2.1.0           
     ## [22] sass_0.4.10         otel_0.2.0          cli_3.6.6          
     ## [25] pkgdown_2.2.0       withr_3.0.2         magrittr_2.0.5     
     ## [28] digest_0.6.39       lifecycle_1.0.5     vctrs_0.7.3        
-    ## [31] evaluate_1.0.5      glue_1.8.0          ragg_1.5.2         
+    ## [31] evaluate_1.0.5      glue_1.8.1          ragg_1.5.2         
     ## [34] rmarkdown_2.31      tools_4.5.3         pkgconfig_2.0.3    
     ## [37] htmltools_0.5.9

articles/development_status.html

@@ -122,5 +122,5 @@ loaded via a namespace (and not attached):
 [19] tools_4.5.3         ragg_1.5.2          bslib_0.10.0       
 [22] evaluate_1.0.5      yaml_2.3.12         BiocManager_1.30.27
 [25] otel_0.2.0          jsonlite_2.0.0      rlang_1.2.0        
-[28] fs_2.0.1            htmlwidgets_1.6.4  
+[28] fs_2.1.0            htmlwidgets_1.6.4  
 ```