Update instance repo from cookiecutter template

Author: github-actions[bot]

.cruft.json

@@ -1,6 +1,6 @@
 {
   "template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-  "commit": "d4bdfc5ec4c5029aebf7c0cba65609e20358144d",
+  "commit": "e3ac318273adc2dae7e6b783e4e4c2cc73521d9e",
   "checkout": null,
   "context": {
     "cookiecutter": {
@@ -36,7 +36,7 @@
         "trim_blocks": true
       },
       "_template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-      "_commit": "d4bdfc5ec4c5029aebf7c0cba65609e20358144d"
+      "_commit": "e3ac318273adc2dae7e6b783e4e4c2cc73521d9e"
     }
   },
   "directory": null

.pre-commit-config.yaml

@@ -16,7 +16,7 @@ repos:
     hooks:
       - id: pyproject-fmt
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.11.6
+    rev: v0.11.8
     hooks:
       - id: ruff
         types_or: [python, pyi, jupyter]