Test notebooks

Merge pull request #343 from scverse/feat/claude-agent-skill #194

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Triggered via push July 11, 2026 00:50

PauBadiaM

main

Status Success

Total duration 2m 34s

Artifacts –

notebooks.yaml

on: push

Matrix: test

Annotations

17 warnings

test (omnipath/licenses.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (scell/rna_sc.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (scell/rna_sc.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.

test (omnipath/orthologs.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (omnipath/orthologs.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.

test (spatial/rna_visium.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (spatial/rna_visium.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.

test (scell/rna_psbk.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (scell/rna_psbk.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.

test (bulk/rna.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (bulk/rna.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.

test (example.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (example.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.

test (scell/rna_pstime.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (scell/rna_pstime.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.

test (bench/rna.ipynb)

Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

test (bench/rna.ipynb)

Failed to save: Unable to reserve cache with key setup-uv-2-x86_64-unknown-linux-gnu-ubuntu-24.04-3.13.14-pruned-26c3cd12d082376900c125a45911a2f635688d0f2a076e98f95c18267666e447, another job may be creating this cache.