Adapted template

Author: PauBadiaM

docs/_static/css/custom.css

@@ -2,3 +2,13 @@
 div.cell_output table.dataframe {
     font-size: 0.8em;
 }
+
+/* Adjust the logo size */
+.logo img {
+    width: 50%; /* or any percentage you want */
+    height: auto; /* maintain aspect ratio */
+}
+
+img.no-scaled-link {
+    background: transparent !important;
+}

docs/conf.py

@@ -21,7 +21,7 @@
 info = metadata("decoupler")
 project_name = info["Name"]
 author = info["Author"]
-copyright = f"{datetime.now():%Y}, {author}."
+copyright = f"{datetime.now():%Y}, scverse."
 version = info["Version"]
 urls = dict(pu.split(", ") for pu in info.get_all("Project-URL"))
 repository_url = urls["Source"]
@@ -36,7 +36,7 @@
 
 html_context = {
     "display_github": True,  # Integrate GitHub
-    "github_user": "PauBadiaM",
+    "github_user": "scverse",
     "github_repo": project_name,
     "github_version": "main",
     "conf_py_path": "/docs/",
@@ -96,6 +96,8 @@
     "anndata": ("https://anndata.readthedocs.io/en/stable/", None),
     "scanpy": ("https://scanpy.readthedocs.io/en/stable/", None),
     "numpy": ("https://numpy.org/doc/stable/", None),
+    "matplotlib": ("https://matplotlib.org/stable/", None),
+    "pandas": ("https://pandas.pydata.org/pandas-docs/stable/", None),
 }
 
 # List of patterns, relative to source directory, that match files and
@@ -114,6 +116,8 @@
 html_css_files = ["css/custom.css"]
 
 html_title = project_name
+html_logo = "_static/images/logo.png"
+html_favicon = "_static/images/logo.png"
 
 html_theme_options = {
     "repository_url": repository_url,