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README.md

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[![Conda version][badge-condav]][conda]
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[![Conda downloads][badge-condad]][conda]
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[badge-tests]: https://img.shields.io/github/actions/workflow/status/saezlab/decoupler-py/test.yaml?branch=main
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[badge-docs]: https://img.shields.io/readthedocs/decoupler-py
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[badge-tests]: https://img.shields.io/github/actions/workflow/status/scverse/decoupler/test.yaml?branch=main
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[badge-docs]: https://img.shields.io/readthedocs/decoupler
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[badge-condav]: https://img.shields.io/conda/vn/conda-forge/decoupler-py.svg
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[badge-condad]: https://img.shields.io/conda/dn/conda-forge/decoupler-py.svg
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[badge-issues]: https://img.shields.io/github/issues/saezlab/decoupler-py
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[badge-coverage]: https://codecov.io/gh/saezlab/decoupler-py/branch/main/graph/badge.svg
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[badge-issues]: https://img.shields.io/github/issues/scverse/decoupler
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[badge-coverage]: https://codecov.io/gh/scverse/decoupler/branch/main/graph/badge.svg
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[badge-pypi]: https://img.shields.io/pypi/v/decoupler.svg
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[badge-mdown]: https://static.pepy.tech/badge/decoupler/month
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[badge-adown]: https://static.pepy.tech/badge/decoupler
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[badge-stars]: https://img.shields.io/github/stars/saezlab/decoupler-py?style=flat&logo=github&color=yellow
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[badge-stars]: https://img.shields.io/github/stars/scverse/decoupler?style=flat&logo=github&color=yellow
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`decoupler` is a python package containing different enrichment statistical
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methods to extract biologically driven scores
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4. Install the latest development version:
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```bash
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pip install git+https://github.com/saezlab/decoupler-py.git@main
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pip install git+https://github.com/scverse/decoupler.git@main
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```
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## Release notes
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[uv]: https://github.com/astral-sh/uv
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[scverse discourse]: https://discourse.scverse.org/
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[scverse]: https://scverse.org/
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[issue tracker]: https://github.com/saezlab/decoupler-py/issues
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[tests]: https://github.com/saezlab/decoupler-py/actions/workflows/test.yaml
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[documentation]: https://decoupler-py.readthedocs.io
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[changelog]: https://decoupler-py.readthedocs.io/en/latest/changelog.html
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[api documentation]: https://decoupler-py.readthedocs.io/en/latest/api.html
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[issue tracker]: https://github.com/scverse/decoupler/issues
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[tests]: https://github.com/scverse/decoupler/actions/workflows/test.yaml
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[documentation]: https://decoupler.readthedocs.io
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[changelog]: https://decoupler.readthedocs.io/en/latest/changelog.html
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[api documentation]: https://decoupler.readthedocs.io/en/latest/api.html
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[pypi]: https://pypi.org/project/decoupler
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[down]: https://pepy.tech/project/decoupler
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[conda]: https://anaconda.org/conda-forge/decoupler-py
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[codecoverage]: https://codecov.io/gh/saezlab/decoupler-py
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[codecoverage]: https://codecov.io/gh/scverse/decoupler

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