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Expand file tree Collapse file tree Original file line number Diff line number Diff line change 1+ name : pyXenium
2+ description : |
3+ pyXenium is a Python toolkit for 10x Genomics Xenium data that combines Xenium I/O,
4+ multimodal RNA+protein analysis, contour-aware spatial profiling, topology workflows,
5+ GMI inference, mechanostress analysis, and optional external workflow bridges.
6+ project_home : https://github.com/hutaobo/pyXenium
7+ documentation_home : https://pyxenium.readthedocs.io/en/latest/
8+ tutorials_home : https://pyxenium.readthedocs.io/en/latest/tutorials/index.html
9+ install :
10+ pypi : pyXenium
11+ tags :
12+ - xenium
13+ - spatial omics
14+ - spatial transcriptomics
15+ - multimodal
16+ - anndata
17+ - pathology
18+ license : AGPL-3.0-only
19+ version : 0.4.5
20+ contact :
21+ - hutaobo
22+ test_command : pip install -e ".[dev,docs]" && pytest -q && sphinx-build -b html docs docs/_build/html -W --keep-going
23+ category : ecosystem
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