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Cannot reproduce trajectory inference tutorial #74

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@OXPHOS

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@OXPHOS

Hi there,

I downloaded and ran the trajectory inference Jupyter notebook. I could run smoothly, but I cannot get the plot where cells are overlayed to the trajectory.

(As you can see, the upper image is fine, but the bottoms are wrong.)
example

The results in tutorial are:
example2

I didn't make any change to the code.

I am using scanpy 1.9.3. Any suggestions?

Thanks a lot!

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