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Merge pull request #9 from sdsc-ordes/feat/oss-insight
feat: oss notebook
2 parents 5c9c6b6 + e652230 commit 5a48767

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‎.devcontainer/Dockerfile‎

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FROM ghcr.io/astral-sh/uv:python3.12-bookworm
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# Set locale to avoid warnings
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ENV LC_ALL=C.UTF-8
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ENV LANG=C.UTF-8
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# Install just and other system dependencies
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RUN apt-get update && apt-get install -y \
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sudo \
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curl \
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jq \
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&& curl --proto '=https' --tlsv1.2 -sSf https://just.systems/install.sh | bash -s -- --to /usr/local/bin \
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&& apt-get clean \
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&& rm -rf /var/lib/apt/lists/*
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RUN useradd -ms /bin/bash -u 1000 vscode
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USER vscode
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WORKDIR /workspaces

‎.devcontainer/devcontainer.json‎

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{
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"name": "open-pulse-neo4j-interface-dev",
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"build": {
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"dockerfile": "Dockerfile"
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},
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"remoteUser": "vscode",
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"workspaceFolder": "/workspaces/${localWorkspaceFolderBasename}",
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"customizations": {
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"vscode": {
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"settings": {
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"python.defaultInterpreterPath": "${workspaceFolder}/.venv/bin/python",
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"python.envFile": "${workspaceFolder}/.env"
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},
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"extensions": [
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"ms-python.python",
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"ms-python.vscode-pylance",
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"ms-toolsai.jupyter",
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"tamasfe.even-better-toml",
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"github.copilot",
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"github.copilot-chat"
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]
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}
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},
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"postCreateCommand": "rm -rf .venv && uv venv && uv pip install -e src/neo4j-quickstart -e src/ossinsight-quickstart -e src/tentris-quickstart && echo '. $PWD/.venv/bin/activate' >> /home/vscode/.bashrc"
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}

‎.github/workflows/docker-neo4j-build.yml‎

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name: Build and Push Docker Image for Quickstart
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on:
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release:
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type: [published]
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push :
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paths:
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- 'src/neo4j-quickstart/**'
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- 'tools/images/Dockerfile-neo4j'
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- '.github/workflows/**'
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env:
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REGISTRY: ghcr.io
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jobs:
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build-image:
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runs-on: ubuntu-latest
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#if: github.ref != 'refs/heads/main'
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permissions:
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contents: read
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packages: write
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steps:
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# https://github.com/actions/checkout
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- name: checkout repository
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uses: actions/checkout@v4
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- name: lowercase image name
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run: |
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echo "IMAGE_NAME=${GITHUB_REPOSITORY,,}-neo4j" >> ${GITHUB_ENV}
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# https://github.com/docker/setup-qemu-action
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v3.0.0
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# https://github.com/docker/setup-buildx-action
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- name: Set up Docker Buildx
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id: buildx
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uses: docker/setup-buildx-action@v3.0.0
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- name: Get current release version
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id: release-version
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run: |
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version=$(grep -E '^version += +' pyproject.toml | sed -E 's/.*= +//' | sed "s/['\"]//g")
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echo "version=${version}" >> $GITHUB_OUTPUT
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echo "version_build=${version}_"$(git rev-parse --short "$GITHUB_SHA") >> $GITHUB_OUTPUT
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# https://github.com/docker/build-push-action
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- name: Build Docker image
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uses: docker/build-push-action@v5.0.0
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with:
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context: .
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platforms: linux/amd64
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file: tools/images/Dockerfile-neo4j
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push: false
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tags: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}:${{ steps.release-version.outputs.version_build }}
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build-args: PLATFORM=cu124
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outputs: type=image,annotation-index.org.opencontainers.image.description=Run a Graph Neural Network.
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push-image:
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runs-on: ubuntu-latest
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#if: github.ref == 'refs/heads/main'
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permissions:
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contents: read
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packages: write
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steps:
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# https://github.com/actions/checkout
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- name: checkout repository
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uses: actions/checkout@v4
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- name: lowercase image name
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run: |
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echo "IMAGE_NAME=${GITHUB_REPOSITORY,,}-neo4j" >> ${GITHUB_ENV}
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# https://github.com/docker/setup-qemu-action
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v3.0.0
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# https://github.com/docker/setup-buildx-action
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- name: Set up Docker Buildx
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id: buildx
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uses: docker/setup-buildx-action@v3.0.0
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- name: Get current release version
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id: release-version
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run: |
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version=$(grep -E '^version += +' pyproject.toml | sed -E 's/.*= +//' | sed "s/['\"]//g")
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echo "version=${version}" >> $GITHUB_OUTPUT
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echo "version_build=${version}_"$(git rev-parse --short "$GITHUB_SHA") >> $GITHUB_OUTPUT
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# https://github.com/docker/login-action
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- name: Log in to the Container registry
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uses: docker/login-action@v3.0.0
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with:
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registry: ${{ env.REGISTRY }}
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username: ${{ github.actor }}
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password: ${{ secrets.GITHUB_TOKEN }}
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# https://github.com/docker/metadata-action
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- name: Extract metadata (tags, labels) for Docker
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id: meta
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uses: docker/metadata-action@v5.0.0
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with:
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images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
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tags: |
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type=raw,value=latest,enable=${{ github.event_name == 'push' }}
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type=raw,value=${{ needs.build-image.outputs.version }},enable=${{ github.event_name == 'release' }}
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# https://github.com/docker/build-push-action
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- name: Push Docker image
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uses: docker/build-push-action@v5.0.0
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with:
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context: .
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platforms: linux/amd64
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file: tools/images/Dockerfile-neo4j
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push: true
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tags: ${{ steps.meta.outputs.tags }}
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labels: ${{ steps.meta.outputs.labels }}
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build-args: PLATFORM=cu124
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outputs: type=image,annotation-index.org.opencontainers.image.description=Run a Graph Neural Network.
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name: Build and Push Docker Image for Quickstart
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on:
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release:
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type: [published]
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push :
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paths:
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- 'src/neo4j-quickstart/**'
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- 'tools/images/Dockerfile-neo4j'
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- '.github/workflows/**'
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env:
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REGISTRY: ghcr.io
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jobs:
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build-image:
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runs-on: ubuntu-latest
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#if: github.ref != 'refs/heads/main'
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permissions:
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contents: read
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packages: write
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steps:
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# https://github.com/actions/checkout
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- name: checkout repository
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uses: actions/checkout@v4
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- name: lowercase image name
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run: |
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echo "IMAGE_NAME=${GITHUB_REPOSITORY,,}-neo4j" >> ${GITHUB_ENV}
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# https://github.com/docker/setup-qemu-action
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v3.0.0
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# https://github.com/docker/setup-buildx-action
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- name: Set up Docker Buildx
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id: buildx
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uses: docker/setup-buildx-action@v3.0.0
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- name: Get current release version
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id: release-version
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run: |
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version=$(grep -E '^version += +' pyproject.toml | sed -E 's/.*= +//' | sed "s/['\"]//g")
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echo "version=${version}" >> $GITHUB_OUTPUT
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echo "version_build=${version}_"$(git rev-parse --short "$GITHUB_SHA") >> $GITHUB_OUTPUT
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# https://github.com/docker/build-push-action
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- name: Build Docker image
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uses: docker/build-push-action@v5.0.0
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with:
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context: .
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platforms: linux/amd64
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file: tools/images/Dockerfile-neo4j
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push: false
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tags: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}:${{ steps.release-version.outputs.version_build }}
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build-args: PLATFORM=cu124
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outputs: type=image,annotation-index.org.opencontainers.image.description=Run a Graph Neural Network.
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push-image:
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runs-on: ubuntu-latest
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#if: github.ref == 'refs/heads/main'
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permissions:
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contents: read
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packages: write
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steps:
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# https://github.com/actions/checkout
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- name: checkout repository
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uses: actions/checkout@v4
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- name: lowercase image name
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run: |
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echo "IMAGE_NAME=${GITHUB_REPOSITORY,,}-neo4j" >> ${GITHUB_ENV}
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# https://github.com/docker/setup-qemu-action
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v3.0.0
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# https://github.com/docker/setup-buildx-action
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- name: Set up Docker Buildx
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id: buildx
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uses: docker/setup-buildx-action@v3.0.0
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- name: Get current release version
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id: release-version
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run: |
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version=$(grep -E '^version += +' pyproject.toml | sed -E 's/.*= +//' | sed "s/['\"]//g")
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echo "version=${version}" >> $GITHUB_OUTPUT
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echo "version_build=${version}_"$(git rev-parse --short "$GITHUB_SHA") >> $GITHUB_OUTPUT
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# https://github.com/docker/login-action
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- name: Log in to the Container registry
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uses: docker/login-action@v3.0.0
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with:
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registry: ${{ env.REGISTRY }}
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username: ${{ github.actor }}
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password: ${{ secrets.GITHUB_TOKEN }}
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# https://github.com/docker/metadata-action
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- name: Extract metadata (tags, labels) for Docker
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id: meta
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uses: docker/metadata-action@v5.0.0
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with:
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images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
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tags: |
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type=raw,value=latest,enable=${{ github.event_name == 'push' }}
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type=raw,value=${{ needs.build-image.outputs.version }},enable=${{ github.event_name == 'release' }}
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# https://github.com/docker/build-push-action
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- name: Push Docker image
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uses: docker/build-push-action@v5.0.0
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with:
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context: .
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platforms: linux/amd64
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file: tools/images/Dockerfile-neo4j
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push: true
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tags: ${{ steps.meta.outputs.tags }}
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labels: ${{ steps.meta.outputs.labels }}
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build-args: PLATFORM=cu124
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outputs: type=image,annotation-index.org.opencontainers.image.description=Run a Graph Neural Network.

‎.gitignore‎

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# Tentris environment
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src/tentris-quickstart/.venv/
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# Local environment
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.venv/
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# local test file
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src/neo4j-quickstart/local_test.py
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# Mac related files
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*.DS_Store
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# Any env files anywhere in sub repositories
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*.env
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*quickstart.egg-info
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# Python related files
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__pycache__/
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*.py[cod]
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*$py.class
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*__pycache__
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# Plots
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src/neo4j-quickstart/plots/graphs/*
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!src/neo4j-quickstart/plots/graphs/.gitkeep
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# Cluster plots
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src/neo4j-quickstart/plots/clusters/*
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!src/neo4j-quickstart/plots/clusters/.gitkeep
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# Tentris environment
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src/tentris-quickstart/.venv/
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# Local environment
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.venv/
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# local test file
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src/neo4j-quickstart/local_test.py
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# Mac related files
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*.DS_Store
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# Any env files anywhere in sub repositories
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*.env
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*quickstart.egg-info
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# Python related files
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__pycache__/
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*.py[cod]
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*$py.class
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*__pycache__
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# Plots
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src/neo4j-quickstart/plots/graphs/*
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!src/neo4j-quickstart/plots/graphs/.gitkeep
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# Cluster plots
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src/neo4j-quickstart/plots/clusters/*
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!src/neo4j-quickstart/plots/clusters/.gitkeep
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