fix paths in job files

aparnabg · aparnabg · commit 09f42d9931ef · 2026-07-09T15:39:53.000+05:30
diff --git a/jobs/action_model_testing/vjepa/clips_fixed_length/submit_all_jobs.sh b/jobs/action_model_testing/vjepa/clips_fixed_length/submit_all_jobs.sh
@@ -1,12 +1,12 @@
 #!/bin/bash
 # Usage: bash submit_all.sh
 
-SCRIPT_DIR="${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_crop}"
+JOB_DIR="${JOB_DIR:-/jobs/action_model_testing/vjepa/clips_fixed_length}"
 
 echo "Submitting all 6 jobs (all reuse existing feature cache)..."
 for LABEL in loco rmm; do
   for SEED in 42 123 456; do
-    JID=$(sbatch --parsable "$SCRIPT_DIR/vjepa_clip_level_ablation.sh" $LABEL $SEED)
+    JID=$(sbatch --parsable "$JOB_DIR/vjepa_clip_level_ablation.sh" $LABEL $SEED)
     echo "  $LABEL seed $SEED -> job $JID"
   done
 done
diff --git a/jobs/action_model_testing/vjepa/clips_fixed_length/vjepa_clip_level_ablation.sh b/jobs/action_model_testing/vjepa/clips_fixed_length/vjepa_clip_level_ablation.sh
@@ -5,10 +5,10 @@
 #SBATCH --mem=120GB
 #SBATCH --gres=gpu:h200:1
 #SBATCH --time=04:00:00
-#SBATCH --output=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_crop}/logs/%x_%A.out
-#SBATCH --error=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_crop}/logs/%x_%A.err
+#SBATCH --output=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_fixed_length}/logs/%x_%A.out
+#SBATCH --error=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_fixed_length}/logs/%x_%A.err
 
-SCRIPT_DIR="${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_crop}"
+SCRIPT_DIR="${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_fixed_length}"
 mkdir -p "${SCRIPT_DIR}/logs"
 
 module load miniforge/24.3.0-0
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/job_ab.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/job_ab.sh
@@ -6,10 +6,10 @@
 #SBATCH --gres=gpu:1
 #SBATCH --time=06:00:00
 #SBATCH --array=0-14
-#SBATCH --output=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}/logs/ablation_%A_%a.out
-#SBATCH --error=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}/logs/ablation_%A_%a.err
+#SBATCH --output=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop}/logs/ablation_%A_%a.out
+#SBATCH --error=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop}/logs/ablation_%A_%a.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop}"
 export HF_HOME="${HF_HOME:-/home/aparnabg/.cache/huggingface}"
 export PYTHONUNBUFFERED=1
 
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/launch_all.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/launch_all.sh
@@ -12,16 +12,16 @@
 LOG_DIR="/orcd/data/satra/002/projects/SAILS/vjepa_features/models_output_seeds/clips/vjepa/logs"
 mkdir -p $LOG_DIR
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}"
+JOB_DIR="${JOB_DIR:-/jobs/action_model_testing/vjepa/clips_without_coi_crop}"
 
 # --- Step 1: Submit feature extraction ---
-EXTRACT_JOB=$(sbatch --parsable ${CODE_DIR}/submit_extract.sh)
+EXTRACT_JOB=$(sbatch --parsable ${JOB_DIR}/submit_extract.sh)
 echo "Submitted feature extraction job: $EXTRACT_JOB"
 
 # --- Step 2: Submit seed training jobs (depend on extraction finishing) ---
 SEED_JOB=$(sbatch --parsable \
     --dependency=afterok:${EXTRACT_JOB} \
-    ${CODE_DIR}/submit_seeds.sh)
+    ${JOB_DIR}/submit_seeds.sh)
 echo "Submitted seed training jobs (array): $SEED_JOB"
 echo "  -> Seeds 42, 456, 123 will start after job $EXTRACT_JOB completes"
 
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/job_ab.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/job_ab.sh
@@ -6,10 +6,10 @@
 #SBATCH --gres=gpu:1
 #SBATCH --time=06:00:00
 #SBATCH --array=0-14
-#SBATCH --output=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}/logs/ablation_%A_%a.out
-#SBATCH --error=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}/logs/ablation_%A_%a.err
+#SBATCH --output=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop/rmm}/logs/ablation_%A_%a.out
+#SBATCH --error=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop/rmm}/logs/ablation_%A_%a.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop/rmm}"
 export HF_HOME="${HF_HOME:-/home/aparnabg/.cache/huggingface}"
 export PYTHONUNBUFFERED=1
 
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/launch_all.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/launch_all.sh
@@ -11,16 +11,16 @@
 LOG_DIR="/orcd/data/satra/002/projects/SAILS/vjepa_features/models_output_seeds/clips/rmm/logs"
 mkdir -p $LOG_DIR
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}"
+JOB_DIR="${JOB_DIR:-/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm}"
 
 # --- Step 1: Submit feature extraction ---
-EXTRACT_JOB=$(sbatch --parsable ${CODE_DIR}/submit_extract.sh)
+EXTRACT_JOB=$(sbatch --parsable ${JOB_DIR}/submit_extract.sh)
 echo "Submitted RMM feature extraction job: $EXTRACT_JOB"
 
 # --- Step 2: Submit seed training jobs (depend on extraction finishing) ---
 SEED_JOB=$(sbatch --parsable \
     --dependency=afterok:${EXTRACT_JOB} \
-    ${CODE_DIR}/submit_seeds.sh)
+    ${JOB_DIR}/submit_seeds.sh)
 echo "Submitted RMM seed training jobs (array): $SEED_JOB"
 echo "  -> Seeds 42, 456, 123 will start after job $EXTRACT_JOB completes"
 
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/submit_extract.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/submit_extract.sh
@@ -8,7 +8,7 @@
 #SBATCH --output=/orcd/data/satra/002/projects/SAILS/vjepa_features/models_output_seeds/clips/rmm/logs/extract_%j.out
 #SBATCH --error=/orcd/data/satra/002/projects/SAILS/vjepa_features/models_output_seeds/clips/rmm/logs/extract_%j.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop/rmm}"
 export HF_HOME="${HF_HOME:-/home/aparnabg/.cache/huggingface}"
 export PYTHONUNBUFFERED=1
 
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/submit_seeds.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/rmm/submit_seeds.sh
@@ -6,10 +6,10 @@
 #SBATCH --gres=gpu:1
 #SBATCH --time=06:00:00
 #SBATCH --array=0-2
-#SBATCH --output=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}/logs/probe_%A_%a.out
-#SBATCH --error=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}/logs/probe_%A_%a.err
+#SBATCH --output=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop/rmm}/logs/probe_%A_%a.out
+#SBATCH --error=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop/rmm}/logs/probe_%A_%a.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video/rmm}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop/rmm}"
 export HF_HOME="${HF_HOME:-/home/aparnabg/.cache/huggingface}"
 export PYTHONUNBUFFERED=1
 
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/submit_extract.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/submit_extract.sh
@@ -8,7 +8,7 @@
 #SBATCH --output=/orcd/data/satra/002/projects/SAILS/vjepa_features/models_output_seeds/clips/vjepa/logs/extract_%j.out
 #SBATCH --error=/orcd/data/satra/002/projects/SAILS/vjepa_features/models_output_seeds/clips/vjepa/logs/extract_%j.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop}"
 export HF_HOME="${HF_HOME:-/home/aparnabg/.cache/huggingface}"
 export PYTHONUNBUFFERED=1
 
diff --git a/jobs/action_model_testing/vjepa/clips_without_coi_crop/submit_seeds.sh b/jobs/action_model_testing/vjepa/clips_without_coi_crop/submit_seeds.sh
@@ -6,10 +6,10 @@
 #SBATCH --gres=gpu:1
 #SBATCH --time=06:00:00
 #SBATCH --array=0-2
-#SBATCH --output=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}/logs/probe_%A_%a.out
-#SBATCH --error=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}/logs/probe_%A_%a.err
+#SBATCH --output=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop}/logs/probe_%A_%a.out
+#SBATCH --error=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop}/logs/probe_%A_%a.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjeap_full_video}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/clips_without_coi_crop}"
 export HF_HOME="${HF_HOME:-/home/aparnabg/.cache/huggingface}"
 export PYTHONUNBUFFERED=1
 
diff --git a/jobs/action_model_testing/vjepa/coi_crop/finetune_vjepa2_h5bbox.sh b/jobs/action_model_testing/vjepa/coi_crop/finetune_vjepa2_h5bbox.sh
@@ -5,10 +5,10 @@
 #SBATCH --mem=400G
 #SBATCH --gres=gpu:h100:1
 #SBATCH --time=24:00:00
-#SBATCH --output=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/h5_file_vjepa}/logs/vjepa_ft_%j.out
-#SBATCH --error=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/h5_file_vjepa}/logs/vjepa_ft_%j.err
+#SBATCH --output=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/coi_crop}/logs/vjepa_ft_%j.out
+#SBATCH --error=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/coi_crop}/logs/vjepa_ft_%j.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/h5_file_vjepa}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/coi_crop}"
 mkdir -p "${CODE_DIR}/logs"
 
 module load miniforge/24.3.0-0
diff --git a/jobs/action_model_testing/vjepa/coi_crop/full_finetune_vjepa2_h5bbox.sh b/jobs/action_model_testing/vjepa/coi_crop/full_finetune_vjepa2_h5bbox.sh
@@ -5,10 +5,10 @@
 #SBATCH --mem=400G
 #SBATCH --gres=gpu:h100:1
 #SBATCH --time=24:00:00
-#SBATCH --output=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/h5_file_vjepa}/logs/vjepa_ft_%j.out
-#SBATCH --error=${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/h5_file_vjepa}/logs/vjepa_ft_%j.err
+#SBATCH --output=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/coi_crop}/logs/vjepa_ft_%j.out
+#SBATCH --error=${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/coi_crop}/logs/vjepa_ft_%j.err
 
-CODE_DIR="${CODE_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/h5_file_vjepa}"
+CODE_DIR="${CODE_DIR:-/src/sailsprep/action_model_testing/vjepa/coi_crop}"
 mkdir -p "${CODE_DIR}/logs"
 
 module load miniforge/24.3.0-0
diff --git a/jobs/action_model_testing/vjepa/full_video/run_probe.sh b/jobs/action_model_testing/vjepa/full_video/run_probe.sh
@@ -6,8 +6,8 @@
 #SBATCH --gres=gpu:h200:1
 #SBATCH --time=06:00:00
 #SBATCH --array=0-2
-#SBATCH --output=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}/logs/%x_%A_%a.out
-#SBATCH --error=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}/logs/%x_%A_%a.err
+#SBATCH --output=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}/logs/%x_%A_%a.out
+#SBATCH --error=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}/logs/%x_%A_%a.err
 
 # ── Usage ──────────────────────────────────────────────────────────────
 # sbatch --job-name=flat_loco        run_probe.sh locomotion flat
@@ -48,7 +48,7 @@ conda activate vjepa2-312
 SEEDS=(42 456 123)
 SEED=${SEEDS[$SLURM_ARRAY_TASK_ID]}
 
-SCRIPT_DIR="${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}"
+SCRIPT_DIR="${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}"
 
 if [[ "$MODE" == "flat" ]]; then
     SCRIPT="${SCRIPT_DIR}/train_probe_framelevel.py"
diff --git a/jobs/action_model_testing/vjepa/full_video/two_stage.sh b/jobs/action_model_testing/vjepa/full_video/two_stage.sh
@@ -6,8 +6,8 @@
 #SBATCH --gres=gpu:1
 #SBATCH --time=06:00:00
 #SBATCH --array=0-2
-#SBATCH --output=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}/logs/%x_%A_%a_two.out
-#SBATCH --error=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}/logs/%x_%A_%a_two.err
+#SBATCH --output=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}/logs/%x_%A_%a_two.out
+#SBATCH --error=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}/logs/%x_%A_%a_two.err
 
 # ── Usage ──────────────────────────────────────────────────
 # sbatch --job-name=locomotion two.sh locomotion
@@ -39,7 +39,7 @@ conda activate vjepa2-312
 
 SEEDS=(42 456 123)
 SEED=${SEEDS[$SLURM_ARRAY_TASK_ID]}
-SCRIPT_DIR="${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}"
+SCRIPT_DIR="${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}"
 
 echo "Task: ${TASK}  Seed=${SEED}  array_id=${SLURM_ARRAY_TASK_ID}: $(date)"
 echo "Node: $SLURMD_NODENAME"
diff --git a/jobs/action_model_testing/vjepa/full_video/window.sh b/jobs/action_model_testing/vjepa/full_video/window.sh
@@ -6,8 +6,8 @@
 #SBATCH --gres=gpu:1
 #SBATCH --time=06:00:00
 #SBATCH --array=0-2
-#SBATCH --output=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}/logs/%x_%A_%a.out
-#SBATCH --error=${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}/logs/%x_%A_%a.err
+#SBATCH --output=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}/logs/%x_%A_%a.out
+#SBATCH --error=${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}/logs/%x_%A_%a.err
 
 # ── Usage ──────────────────────────────────────────────────
 # sbatch --job-name=locomotion window.sh locomotion
@@ -39,7 +39,7 @@ conda activate vjepa2-312
 
 SEEDS=(42 456 123)
 SEED=${SEEDS[$SLURM_ARRAY_TASK_ID]}
-SCRIPT_DIR="${SCRIPT_DIR:-/home/aparnabg/orcd/scratch/all_project_files/action_sota_models/vjepa_code_frame_window}"
+SCRIPT_DIR="${SCRIPT_DIR:-/src/sailsprep/action_model_testing/vjepa/full_video}"
 
 echo "Task: ${TASK}  Seed=${SEED}  array_id=${SLURM_ARRAY_TASK_ID}: $(date)"
 echo "Node: $SLURMD_NODENAME"
