OLD_HOME

General information

• Modern Cpp recommended reading and video links

• CppSessions

• Pre-retreat schedule

• Retreat Schedule

• SDSL

Draft documents and design proposals

Meta

• Git Repository Structure
• File Naming and include conventions
• Initial requirements (dependencies, compilers, platforms)

Code general

• General Design Changes
• Style-Guide
• Namespaces
• Classes and Structs
• Function parameters
• Thread Safety
• Exceptions

Modules

• Argument Parser seqan3/arg_parse
• Alphabets seqan3/alph
• Containers seqan3/containers
• Alignments seqan3/align
• Indexes seqan3/index
• Input/Output seqan3/io
  • IO-General (filesystem, compression...)
  • IO-Sequence (fasta, fastq...)
  • IO-Alignments (sam, bam, blast, ...)
  • IO-RNA-Structure

Drafts for new modules:

• Align module