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127 lines (127 loc) · 5.62 KB
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Copy pathmodules.json
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127 lines (127 loc) · 5.62 KB
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{
"name": "seqeralabs/rustqc-benchmarks",
"homePage": "https://github.com/seqeralabs/rustqc-benchmarks",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"dupradar": {
"branch": "master",
"git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
"installed_by": ["modules"]
},
"gunzip": {
"branch": "master",
"git_sha": "96c57dfd98a0641886a67bd449fe33ee2ec0e374",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "2c73cc8fa92cf48de3da0b643fdf357a8a290b36",
"installed_by": ["modules"]
},
"preseq/lcextrap": {
"branch": "master",
"git_sha": "b80fa93d646109e3dc86e79010bf7c0b0af8ce29",
"installed_by": ["modules"]
},
"qualimap/rnaseq": {
"branch": "master",
"git_sha": "1d2684a52df064573979f069272122fc73e02662",
"installed_by": ["modules"]
},
"rseqc/bamstat": {
"branch": "master",
"git_sha": "0145202ae8a9f39a4e7c533f667c38989af799b2",
"installed_by": ["modules"]
},
"rseqc/inferexperiment": {
"branch": "master",
"git_sha": "0145202ae8a9f39a4e7c533f667c38989af799b2",
"installed_by": ["modules"]
},
"rseqc/innerdistance": {
"branch": "master",
"git_sha": "0145202ae8a9f39a4e7c533f667c38989af799b2",
"installed_by": ["modules"]
},
"rseqc/junctionannotation": {
"branch": "master",
"git_sha": "0145202ae8a9f39a4e7c533f667c38989af799b2",
"installed_by": ["modules"]
},
"rseqc/junctionsaturation": {
"branch": "master",
"git_sha": "0145202ae8a9f39a4e7c533f667c38989af799b2",
"installed_by": ["modules"]
},
"rseqc/readdistribution": {
"branch": "master",
"git_sha": "eed5d14302a6c9070dcc25feeab707a27a4b3254",
"installed_by": ["modules"]
},
"rseqc/readduplication": {
"branch": "master",
"git_sha": "0145202ae8a9f39a4e7c533f667c38989af799b2",
"installed_by": ["modules"]
},
"rseqc/tin": {
"branch": "master",
"git_sha": "eed5d14302a6c9070dcc25feeab707a27a4b3254",
"installed_by": ["modules"],
"patch": "modules/nf-core/rseqc/tin/rseqc-tin.diff"
},
"samtools/flagstat": {
"branch": "master",
"git_sha": "1d2fbdcbca677bbe8da0f9d0d2bb7c02f2cab1c9",
"installed_by": ["modules"]
},
"samtools/idxstats": {
"branch": "master",
"git_sha": "1d2fbdcbca677bbe8da0f9d0d2bb7c02f2cab1c9",
"installed_by": ["modules"]
},
"samtools/index": {
"branch": "master",
"git_sha": "1d2fbdcbca677bbe8da0f9d0d2bb7c02f2cab1c9",
"installed_by": ["modules"]
},
"samtools/sort": {
"branch": "master",
"git_sha": "5cb9a8694da0a0e550921636bb60bc8c56445fd7",
"installed_by": ["modules"]
},
"samtools/stats": {
"branch": "master",
"git_sha": "fe93fde0845f907fc91ad7cc7d797930408824df",
"installed_by": ["modules"]
},
"subread/featurecounts": {
"branch": "master",
"git_sha": "eb1966338ee455671659c3dc2520057792342823",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "271e7fc14eb1320364416d996fb077421f3faed2",
"installed_by": ["subworkflows"]
},
"utils_nfschema_plugin": {
"branch": "master",
"git_sha": "4b406a74dc0449c0401ed87d5bfff4252fd277fd",
"installed_by": ["subworkflows"]
}
}
}
}
}
}