Fix prettier formatting on remaining AGENTS.md files

Co-authored-by: Florian Wuennemann <flowuenne@gmail.com>

Author: cursoragent

AGENTS.md

@@ -13,17 +13,18 @@ input CSV (id, workspace, group)
 ```
 
 Additional paths (always active):
+
 - `SEQERA_RUNS_DUMP` (tower-cli) → run dump dirs → `MULTIQC` + `PLOT_RUN_GANTT`
 
 ## Key Params
 
-| Param | Default | Purpose |
-|---|---|---|
-| `generate_benchmark_report` | false | Enable benchmark report |
-| `benchmark_aws_cur_report` | null | AWS CUR parquet for cost analysis |
-| `seqera_api_endpoint` | `https://api.cloud.seqera.io` | Platform API URL |
-| `skip_run_gantt` | false | Skip Gantt chart generation |
-| `skip_multiqc` | false | Skip MultiQC aggregation |
+| Param                       | Default                       | Purpose                           |
+| --------------------------- | ----------------------------- | --------------------------------- |
+| `generate_benchmark_report` | false                         | Enable benchmark report           |
+| `benchmark_aws_cur_report`  | null                          | AWS CUR parquet for cost analysis |
+| `seqera_api_endpoint`       | `https://api.cloud.seqera.io` | Platform API URL                  |
+| `skip_run_gantt`            | false                         | Skip Gantt chart generation       |
+| `skip_multiqc`              | false                         | Skip MultiQC aggregation          |
 
 ## Plugins
 

assets/AGENTS.md

@@ -6,15 +6,15 @@
 
 Seqera brand color definitions. Single source of truth for all report colors.
 
-| Token | Hex | Usage |
-|---|---|---|
-| Deep Green (accent) | `#087F68` | Hover, links, text on light bg, stat numbers |
+| Token                       | Hex       | Usage                                             |
+| --------------------------- | --------- | ------------------------------------------------- |
+| Deep Green (accent)         | `#087F68` | Hover, links, text on light bg, stat numbers      |
 | Seqera Green (accent_light) | `#31C9AC` | CTA buttons, icons, decorative. **NEVER as text** |
-| Soft Green (accent_surface) | `#E2F7F3` | Tag bg, card bg, section bg |
-| Dark Brand (heading) | `#201637` | Headings, footer, primary text |
-| Border | `#CFD0D1` | Border color |
-| Neutral | `#F7F7F7` | Section backgrounds |
-| White | `#ffffff` | Page bg, text on dark surfaces |
+| Soft Green (accent_surface) | `#E2F7F3` | Tag bg, card bg, section bg                       |
+| Dark Brand (heading)        | `#201637` | Headings, footer, primary text                    |
+| Border                      | `#CFD0D1` | Border color                                      |
+| Neutral                     | `#F7F7F7` | Section backgrounds                               |
+| White                       | `#ffffff` | Page bg, text on dark surfaces                    |
 
 **Critical rule:** Never use white text on Seqera Green bg — use Dark Brand instead.
 

lib/AGENTS.md

@@ -8,12 +8,12 @@ nf-boost `request()` wrappers for Seqera Platform API. Used in the v2 benchmark
 
 ### Methods
 
-| Method | Purpose |
-|---|---|
-| `apiGet(url, headers)` | Single GET request, returns parsed JSON map |
-| `apiGetAllTasks(baseUrl, headers)` | Paginated GET for `/tasks` endpoint (100/page) |
-| `resolveWorkspaceId(workspace, apiEndpoint, headers)` | "org/workspace" string → numeric workspace ID |
-| `fetchRunData(meta, apiEndpoint)` | Orchestrator: calls 4 endpoints per run → `{workflow, metrics, tasks, progress}` |
+| Method                                                | Purpose                                                                          |
+| ----------------------------------------------------- | -------------------------------------------------------------------------------- |
+| `apiGet(url, headers)`                                | Single GET request, returns parsed JSON map                                      |
+| `apiGetAllTasks(baseUrl, headers)`                    | Paginated GET for `/tasks` endpoint (100/page)                                   |
+| `resolveWorkspaceId(workspace, apiEndpoint, headers)` | "org/workspace" string → numeric workspace ID                                    |
+| `fetchRunData(meta, apiEndpoint)`                     | Orchestrator: calls 4 endpoints per run → `{workflow, metrics, tasks, progress}` |
 
 ### API Endpoints Called (per run)