nf-raffle/nextflow_schema.json at main · seqeralabs/nf-raffle · GitHub

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{
    "$schema": "https://json-schema.org/draft/2020-12/schema",
    "$id": "https://raw.githubusercontent.com///nextflow_schema.json",
    "title": " pipeline parameters",
    "description": "",
    "type": "object",
    "$defs": {
        "input_output_options": {
            "title": "Input/output options",
            "type": "object",
            "fa_icon": "fas fa-terminal",
            "description": "Define where the pipeline should find input data and save output data.",
            "required": [
                "email",
                "event"
            ],
            "properties": {
                "email": {
                    "type": "string",
                    "description": "Enter your email address here.",
                    "fa_icon": "fas fa-envelope",
                    "help_text": "Set this parameter to your e-mail address to get a summary e-mail with details of the run sent to you when the workflow exits. If set in your user config file (`~/.nextflow/config`) then you don't need to specify this on the command line for every run.",
                    "pattern": "^([a-zA-Z0-9_\\-\\.]+)@([a-zA-Z0-9_\\-\\.]+)\\.([a-zA-Z]{2,5})$"
                },
                "affiliation": {
                    "type": "string",
                    "description": "Your company or institution name (organization).",
                    "fa_icon": "fas fa-building"
                },
                "first_name": {
                    "type": "string",
                    "description": "Your first name. Required for events that request it (e.g. ISMB/BOSC 2026).",
                    "fa_icon": "fas fa-user"
                },
                "last_name": {
                    "type": "string",
                    "description": "Your last name. Required for events that request it (e.g. ISMB/BOSC 2026).",
                    "fa_icon": "fas fa-user"
                },
                "event": {
                    "type": "string",
                    "default": "ismb_bosc_2026",
                    "description": "Which event are you attending?",
                    "enum": [
                        "ismb_bosc_2026",
                        "fog_2026"
                    ],
                    "fa_icon": "fas fa-ticket-alt"
                },
                "outdir": {
                    "type": "string",
                    "format": "directory-path",
                    "description": "The output directory where the results will be saved. You have to use absolute paths to storage on Cloud infrastructure.",
                    "fa_icon": "fas fa-folder-open",
                    "default": "results"
                },
                "ticket_number_emit_session_id": {
                    "type": "boolean",
                    "hidden": true
                }
            }
        }
    },
    "allOf": [
        {
            "$ref": "#/$defs/input_output_options"
        }
    ]
}