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OTP/CIViC update
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R/sysdata.rda

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data-raw/data-raw.R

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@@ -213,7 +213,7 @@ biomarkers[['metadata']] <- metadata$biomarkers
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# substr(as.character(packageVersion("pharmOncoX")),1,4),
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# as.character(as.integer(substr(as.character(packageVersion("pharmOncoX")),5,5)) + 1))
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version_bump <- "2.1.5"
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version_bump <- "2.1.6"
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db <- list()
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db[['biomarkers']] <- biomarkers

data-raw/drug_utilities.R

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@@ -78,7 +78,7 @@ get_chembl_pubchem_xref <- function(
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### TARGETED ANTICANCER COMPOUNDS FROM OPEN TARGETS
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get_otp_cancer_drugs <-
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function(path_data_raw = NULL,
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ot_version = "2025.09"){
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ot_version = "2025.12"){
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cancer_terms <- list()
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cancer_terms[['all']] <- phenOncoX::get_terms(

data-raw/metadata_pharm_oncox.xlsx

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