fix

stefanks · stefanks · commit aed87e96bb13 · 2017-02-14T18:22:58.000-06:00
diff --git a/EngineLayer/Analysis/AnalysisEngine.cs b/EngineLayer/Analysis/AnalysisEngine.cs
@@ -556,7 +556,7 @@ protected override MyResults RunSpecific()
             {
                 Dictionary<CompactPeptide, HashSet<PeptideWithSetModifications>> local = compactPeptideToProteinPeptideMatching.ToDictionary(b => b.Key, b => new HashSet<PeptideWithSetModifications>());
                 for (int i = fff.Item1; i < fff.Item2; i++)
-                    foreach (var peptideWithPossibleModifications in proteinList[i].Digest(protease, maximumMissedCleavages, InitiatorMethionineBehavior.Variable, fixedModifications))
+                    foreach (var peptideWithPossibleModifications in proteinList[i].Digest(protease, maximumMissedCleavages, initiatorMethionineBehavior, fixedModifications))
                     {
                         if (peptideWithPossibleModifications.Length <= 1)
                             continue;

Original file line number	Diff line number	Diff line change
`@@ -556,7 +556,7 @@ protected override MyResults RunSpecific()`
`556`	`556`	`{`
`557`	`557`	`Dictionary<CompactPeptide, HashSet<PeptideWithSetModifications>> local = compactPeptideToProteinPeptideMatching.ToDictionary(b => b.Key, b => new HashSet<PeptideWithSetModifications>());`
`558`	`558`	`for (int i = fff.Item1; i < fff.Item2; i++)`
`559`		`- foreach (var peptideWithPossibleModifications in proteinList[i].Digest(protease, maximumMissedCleavages, InitiatorMethionineBehavior.Variable, fixedModifications))`
	`559`	`+ foreach (var peptideWithPossibleModifications in proteinList[i].Digest(protease, maximumMissedCleavages, initiatorMethionineBehavior, fixedModifications))`
`560`	`560`	`{`
`561`	`561`	`if (peptideWithPossibleModifications.Length <= 1)`
`562`	`562`	`continue;`