Tools for bioinformatics, many of which are also used in the text book Bioinformatics for Evolutionary Biologists by Bernhard Haubold and Angelika Börsch-Haubold.
Bernhard Haubold, haubold@evolbio.mpg.de
- Install Windows Subsystem for Linux
- Clone repo and install additional packages
git clone https://github.com/evolbioinf/biobox
cd biobox
bash scripts/setup.sh
- Make package
make
The directory bin should now contain the programs listed in progs.txt
- Install X-Code
xcode-select --install
- Install Homebrew
- Install packages
brew tap brewsci/bio
brew install brewsci/bio/libdivsufsort git gnuplot golang
graphviz gsl tcl-tk xquartz
git clone https://github.com/evolbioinf/biobox
cd biobox
- Make package
make
The directory bin should now contain the programs listed in progs.txt
git clone https://github.com/evolbioinf/biobox
cd biobox
bash scripts/setupArch.sh
- Make package
make
The directory bin should now contain the programs listed in progs.txt