Organize structure of the project

[martinmatak]

• Organize scripts so that they are not in the top level folder
• Write a short document describing what each folder contains. The structure is unclear at this point. Given that we are probably going to leverage this code for quite a bit, it would be good to clean it up somewhat.

[martinmatak]

@rospoly here is a first PR for this: #5

but it doesn't cover the bullets from the requirements of this issue (originally requested from @zvonimir in #1)

It seems to me the project has a lot of dead code and unused scripts, but I guess you put them for a reason there. Maybe we can go through it together? Or you can reorganize structure of the project since you know what you need and what you don't need anymore?

[zvonimir]

Thanks @martinmatak! I think @rospoly has been super busy wrapping up his internship. So let's do basic clean-up now, and we can do other things once he emerges after the internship.

[rospoly]

Hey guys! Sure, I can start by removing dead code/files we do not use anymore. Thank you