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@@ -44,7 +44,7 @@ Terminology: a **gene call** is an optimal set of exons predicted based on simil
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--slice-search if refernceDB is a profile database, should be added
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### Collecting optimal exons sets:
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### Calling optimal exons sets:
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This module will extract all putative protein fragments from each contig and strand, query them against the reference targets and use dynamic programming to retain for each **T** the optimal compatible exon set from each **C** & **S** (thus creating **TCS** calls).
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