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updated MetaEuk publication
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README.md

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MetaEuk is a modular toolkit designed for large-scale gene discovery and annotation in eukaryotic metagenomic contigs. Metaeuk combines the fast and sensitive homology search capabilities of [MMseqs2](https://github.com/soedinglab/MMseqs2) with a dynamic programming procedure to recover optimal exons sets. It reduces redundancies in multiple discoveries of the same gene and resolves conflicting gene predictions on the same strand. MetaEuk is GPL-licensed open source software that is implemented in C++ and available for Linux and macOS. The software is designed to run on multiple cores.
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Levy Karin E, Mirdita M and Soeding J. MetaEuk – sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics.
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MetaEuk is accepted to Microbiome (2020). You can find the prepreint on [bioRxiv](https://doi.org/10.1101/851964)
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## Publication
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[Levy Karin E, Mirdita M and Soeding J. MetaEuk – sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics. Microbiome. 2020; 8:48](https://rdcu.be/b3ozK)
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<p align="center"><img src="https://github.com/soedinglab/metaeuk/blob/master/imgs/MetaEuk.png" height="250"/></p>
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