Downloading alphafold2_ptm weights to .: 100%|██████████| 3.47G/3.47G [00:24<00:00, 151MB/s]
ModuleNotFoundError Traceback (most recent call last)
/content/colabfold/batch.py in run(queries, result_dir, num_models, is_complex, num_recycles, recycle_early_stop_tolerance, model_order, initial_guess, num_ensemble, model_type, msa_mode, use_templates, custom_template_path, custom_template_cache_path, num_relax, relax_max_iterations, relax_tolerance, relax_stiffness, relax_max_outer_iterations, keep_existing_results, rank_by, pair_mode, pairing_strategy, data_dir, host_url, user_agent, random_seed, num_seeds, recompile_padding, zip_results, prediction_callback, save_single_representations, save_pair_representations, skip_output, jobname_prefix, save_all, save_recycles, use_dropout, use_gpu_relax, stop_at_score, dpi, max_seq, max_extra_seq, pdb_hit_file, local_pdb_path, use_cluster_profile, feature_dict_callback, calc_extra_ptm, use_probs_extra, max_template_date, max_template_hits, **kwargs)
1227 # check if TPU is available
-> 1228 from tpu_info import device
1229 if len(device.get_local_chips()) > 0:
ModuleNotFoundError: No module named 'tpu_info'
During handling of the above exception, another exception occurred:
ImportError Traceback (most recent call last)
12 frames
/usr/local/lib/python3.12/dist-packages/tensorflow/lite/python/metrics/wrapper/metrics_wrapper.py in
17 from tensorflow.compiler.mlir.lite.metrics import converter_error_data_pb2
18 from tensorflow.compiler.mlir.lite.python import wrap_converter
---> 19 from tensorflow.lite.python.metrics._pywrap_tensorflow_lite_metrics_wrapper import MetricsWrapper # pylint: disable=unused-import
20
21
ImportError: /usr/local/lib/python3.12/dist-packages/tensorflow/lite/python/metrics/_pywrap_tensorflow_lite_metrics_wrapper.so: undefined symbol: Wrapped_PyInit__pywrap_tensorflow_lite_metrics_wrapper
NOTE: If your import is failing due to a missing package, you can
manually install dependencies using either !pip or !apt.
To view examples of installing some common dependencies, click the
"Open Examples" button below.
Downloading alphafold2_ptm weights to .: 100%|██████████| 3.47G/3.47G [00:24<00:00, 151MB/s]
ModuleNotFoundError Traceback (most recent call last)
/content/colabfold/batch.py in run(queries, result_dir, num_models, is_complex, num_recycles, recycle_early_stop_tolerance, model_order, initial_guess, num_ensemble, model_type, msa_mode, use_templates, custom_template_path, custom_template_cache_path, num_relax, relax_max_iterations, relax_tolerance, relax_stiffness, relax_max_outer_iterations, keep_existing_results, rank_by, pair_mode, pairing_strategy, data_dir, host_url, user_agent, random_seed, num_seeds, recompile_padding, zip_results, prediction_callback, save_single_representations, save_pair_representations, skip_output, jobname_prefix, save_all, save_recycles, use_dropout, use_gpu_relax, stop_at_score, dpi, max_seq, max_extra_seq, pdb_hit_file, local_pdb_path, use_cluster_profile, feature_dict_callback, calc_extra_ptm, use_probs_extra, max_template_date, max_template_hits, **kwargs)
1227 # check if TPU is available
-> 1228 from tpu_info import device
1229 if len(device.get_local_chips()) > 0:
ModuleNotFoundError: No module named 'tpu_info'
During handling of the above exception, another exception occurred:
ImportError Traceback (most recent call last)
12 frames
/usr/local/lib/python3.12/dist-packages/tensorflow/lite/python/metrics/wrapper/metrics_wrapper.py in
17 from tensorflow.compiler.mlir.lite.metrics import converter_error_data_pb2
18 from tensorflow.compiler.mlir.lite.python import wrap_converter
---> 19 from tensorflow.lite.python.metrics._pywrap_tensorflow_lite_metrics_wrapper import MetricsWrapper # pylint: disable=unused-import
20
21
ImportError: /usr/local/lib/python3.12/dist-packages/tensorflow/lite/python/metrics/_pywrap_tensorflow_lite_metrics_wrapper.so: undefined symbol: Wrapped_PyInit__pywrap_tensorflow_lite_metrics_wrapper
NOTE: If your import is failing due to a missing package, you can
manually install dependencies using either !pip or !apt.
To view examples of installing some common dependencies, click the
"Open Examples" button below.