fix a few things, k

Author: ctb

src/sourmash/commands.py

@@ -942,7 +942,7 @@ def gather(args):
 
     if args.linear:  # force linear traversal?
         databases = [LazyLinearIndex(db) for db in databases]
-    elif 0:
+    elif 1:
         # @CTB foo revindex
         from sourmash.index.revindex import RevIndex
         from sourmash.index import ZipFileLinearIndex

src/sourmash/index/revindex.py

@@ -242,8 +242,8 @@ def counter_gather(self, query, threshold_bp, **kwargs):
         self._init_inner()
 
         counter = RevIndex_CounterGather(query, self, threshold_bp)
-        #for result in self.prefetch(query, threshold_bp=threshold_bp):
-        #    counter.add(result.signature)
+        for result in self.prefetch(query, threshold_bp=threshold_bp):
+            counter.add(result.signature)
 
         return counter