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Installation issue: llvm 14.0.6 #1764

@Markus92

Description

@Markus92

Steps to reproduce the issue

Working on an updated package for Relion, but LLVM doesn't build. Seems to rely on distutils (setuptools) but the Python it uses is too new to include it.

Relevant spec (sorry, hitting the character limit otherwise)

 -       ^[email protected]+gl+shared+xft build_system=generic arch=linux-rhel9-broadwell %c,[email protected]
 -           ^[email protected] build_system=bundle arch=linux-rhel9-broadwell
 -               ^[email protected]+glx+llvm+opengl~opengles+osmesa~strip build_system=meson buildtype=release default_library:=shared arch=linux-rhel9-broadwell %c,[email protected]
[+]                  ^[email protected]~color build_system=autotools arch=linux-rhel9-broadwell %c,[email protected]                                                                                                       [+]                  ^[email protected]+lex~nls build_system=autotools arch=linux-rhel9-broadwell %c,[email protected]                                                                                                      [+]                  ^[email protected] build_system=autotools arch=linux-rhel9-broadwell %[email protected]                                                                                                              [+]                  ^[email protected]~block_signals~conservative_checks~cxx_exceptions~debug~debug_frame+docs~pic+tests+weak_backtrace~xz~zlib build_system=autotools components:=none libs:=shared,static arch=linux-rhel9-broadwell %c,[email protected]
[+]                  ^[email protected] build_system=autotools arch=linux-rhel9-broadwell %[email protected]                                                                                                          [+]                  ^[email protected] build_system=autotools arch=linux-rhel9-broadwell %[email protected]
 -                   ^[email protected]+clang~cuda~flang+gold~ipo+libomptarget~libomptarget_debug~link_llvm_dylib+lld+lldb+llvm_dylib+lua~mlir+polly~python~split_dwarf~z3 build_system=cmake build_type=Release compiler-rt=runtime generator=ninja libcxx=runtime libunwind=runtime openmp=runtime patches:=1f42874,25bc503,6379168,8248141,b216cff,cb8e645 shlib_symbol_version=none targets:=all version_suffix=none arch=linux-rhel9-broadwell %c,[email protected]    
...

Error message

Error message
==> No binary for llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef found: installing from source                                                                                                            [225/1835]==> Installing llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef [116/228]
==> Fetching https://mirror.spack.io/_source-cache/archive/98/98f15f842700bdb7220a166c8d2739a03a72e775b67031205078f39dd756a055.tar.gz
    [100%]  158.11 MB @   68.7 MB/s
==> Fetching https://mirror.spack.io/_source-cache/archive/82/82481418766b4b949ea808d956ff3800b9a241a576370114862428bb0e25ee1f
    [100%]  876.00  B @    5.3 MB/s
==> Fetching https://mirror.spack.io/_source-cache/archive/b2/b216cff38659c176c5381e9dda3252edbb204e6f6f1f33e843a9ebcc42732e5d
    [100%]    3.20 KB @   14.8 MB/s
==> Fetching https://mirror.spack.io/_source-cache/archive/25/25bc503f7855229620e56e76161cf4654945aef0be493a2d8d9e94a088157b7c
    [100%]    2.99 KB @   23.3 MB/s
==> Fetching https://mirror.spack.io/_source-cache/archive/1f/1f4287465b3e499911e039e6cc2f395b8cb00eb8a0a223fa0db3704ba77f9969
    [100%]    2.63 KB @   18.3 MB/s
==> Applied patch https://github.com/llvm/llvm-project/commit/1b4fdf18bc2aaa2d46bf072475dd9cbcd44a9fee.patch?full_index=1                                                                                         ==> Applied patch /home/mark/.spack/package_repos/fncqgg4/repos/spack_repo/builtin/packages/llvm/llvm13-14-thread.patch                                                                                           ==> Applied patch https://github.com/llvm/llvm-project/commit/91ccd8248c85385a5654c63c302a37d97f811bab.patch?full_index=1                                                                                         ==> Applied patch https://github.com/llvm/llvm-project/commit/3a362a9f38b95978160377ee408dbc7d14af9aad.patch?full_index=1                                                                                         ==> Applied patch https://github.com/llvm/llvm-project/commit/9f1d90bf91570efa124c4a86cd033de374d1049a.patch?full_index=1                                                                                         ==> Applied patch /home/mark/.spack/package_repos/fncqgg4/repos/spack_repo/builtin/packages/llvm/add-include-for-libelf-llvm-12-14.patch                                                                          ==> Ran patch() for llvm                                                                                                                                                                                          ==> llvm: Executing phase: 'cmake'                                                                                                                                                                                ==> llvm: Executing phase: 'build'                                                                                                                                                                                ==> Error: ProcessError: Command exited with status 1:                                                                                                                                                                '/project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/ninja-1.12.1-ekmtovcb3geg6f7i43k3d7oyvjdlaczs/bin/ninja' '-j12' '-v'                                                                                                                                                                                                                                                                                                  3 errors found in build log:                                                                                                                                                                                           22515    [601/606] Building CXX object libcxx/src/CMakeFiles/cxx_static.dir/filesystem/operations.cpp.o                                                                                                           22516    [602/606] Building CXX object libcxx/src/CMakeFiles/cxx_static.dir/ios.instantiations.cpp.o                                                                                                              22517    [603/606] Building CXX object libcxxabi/src/CMakeFiles/cxxabi_static.dir/cxa_demangle.cpp.o                                                                                                              22518    [604/606] Linking CXX static library lib/libc++abi.a                                                                                                                                                     22519    [605/606] Building CXX object libcxx/src/CMakeFiles/cxx_static.dir/locale.cpp.o                                                                                                                          22520    [606/606] Linking CXX static library lib/libc++.a                                                                                                                                                     >> 22521    FAILED: lib/libc++.a                                                                                                                                                                                     22522    : && /project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/cmake-3.30.9-6bd5emxodwl4nog6zbefnslggt7l37x5/bin/cmake -E rm -f lib/libc++.a &                                                                     & /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/bin/llvm-ar Dqc lib/libc++.a  libcxx/src                                                                     /CMakeFiles/cxx_static.dir/algorithm.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/any.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/atomic.cpp.o l                                                                     ibcxx/src/CMakeFiles/cxx_static.dir/barrier.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/bind.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/charco                                                                     nv.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/chrono.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/condition_variable.cpp.o libcxx/src/CMakeFile                                                                     s/cxx_static.dir/condition_variable_destructor.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/exception.cpp.o libcxx/src/CMakeFiles/cxx_static.di                                                                     r/functional.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/future.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/hash.cpp.o libcxx/src/CMakeFiles/cx                                                                     x_static.dir/legacy_pointer_safety.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/memory.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/mutex.cpp.o l                                                                     ibcxx/src/CMakeFiles/cxx_static.dir/mutex_destructor.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/new.cpp.o libcxx/src/CMakeFiles/cxx_static.di                                                                     r/optional.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/random_shuffle.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/ryu/d2fixed.cpp.o libcxx/src/                                                                     CMakeFiles/cxx_static.dir/ryu/d2s.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/ryu/f2s.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/shared_mutex.                                                                     cpp.o libcxx/src/CMakeFiles/cxx_static.dir/stdexcept.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/string.cpp.o libcxx/src/CMakeFiles/cxx_static                                                                     .dir/system_error.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/thread.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/typeinfo.cpp.o libcxx/src/CMak                                                                     eFiles/cxx_static.dir/utility.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/valarray.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/variant.cpp.o li                                                                     bcxx/src/CMakeFiles/cxx_static.dir/vector.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/debug.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/random.                                                                     cpp.o libcxx/src/CMakeFiles/cxx_static.dir/ios.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/ios.instantiations.cpp.o libcxx/src/CMakeFiles/cxx_                                                                     static.dir/iostream.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/locale.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/regex.cpp.o libcxx/src/CMake                                                                     Files/cxx_static.dir/strstream.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/filesystem/operations.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/fi                                                                     lesystem/directory_iterator.cpp.o libcxx/src/CMakeFiles/cxx_static.dir/filesystem/int128_builtins.cpp.o && /tmp/mark/spack-stage/spack-stage-                                                                     llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/bin/llvm-ranlib -D lib/libc++.a && cd /tmp/mark/spack-stage/spack-stage-llvm                                                                     -14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/runtimes/runtimes-bins/compiler-rt/lib/fuzzer/libcxx_fuzzer_x86_64/libcxx/src &&                                                                      /project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/python-venv-1.0-6q6whiis6j26yacqvquuhcgspq653teq/bin/python3.13 /tmp/mark/spack-sta                                                                     ge/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/libcxx/utils/merge_archives.py -o /tmp/mark/spack-stage/spack-stage-llv                                                                     m-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/runtimes/runtimes-bins/compiler-rt/lib/fuzzer/libcxx_fuzzer_x86_64/lib/libc++.a                                                       
     22527    ninja: build stopped: subcommand failed.

     ...

     22536    /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/openmp/runtime/src/kmp_affinity.cpp:1772:13: note: u
              se '==' to turn this assignment into an equality comparison
     22537      while (pu = hwloc_get_next_obj_by_type(tp, HWLOC_OBJ_PU, pu)) {
     22538                ^
     22539                ==
     22540    1 warning generated.
     22541    [1614/1890] Building CXX object libcxx/src/CMakeFiles/cxx_static.dir/shared_mutex.cpp.o                                                                                                               >> 22542    FAILED: compiler-rt/lib/fuzzer/libcxx_fuzzer_x86_64/src/libcxx_fuzzer_x86_64-stamp/libcxx_fuzzer_x86_64-build compiler-rt/lib/fuzzer/libcxx_f
              uzzer_x86_64/lib/libc++.a compiler-rt/lib/fuzzer/libcxx_fuzzer_x86_64/lib/libc++abi.a /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7lel                                                                     n24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/runtimes/runtimes-bins/compiler-rt/lib/fuzzer/libcxx_fuzzer_x86_64/src/libcxx_fuzzer_x86_64-stamp                                                                     /libcxx_fuzzer_x86_64-build /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/runtimes/runti
              mes-bins/compiler-rt/lib/fuzzer/libcxx_fuzzer_x86_64/lib/libc++.a /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2
              jef/spack-build-ariqx7l/runtimes/runtimes-bins/compiler-rt/lib/fuzzer/libcxx_fuzzer_x86_64/lib/libc++abi.a                                                                                               22543    cd /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/runtimes/runtimes-bins/compiler-rt/lib/                                                                     fuzzer/libcxx_fuzzer_x86_64 && /project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/cmake-3.30.9-6bd5emxodwl4nog6zbefnslggt7l37x5/bin/cma                                                                     ke --build .                                                                                                                                                                                             22544    [1616/1890] Building CXX object libcxx/src/CMakeFiles/cxx_static.dir/valarray.cpp.o                                                                                                                      22545    [1617/1890] Building CXX object compiler-rt/lib/tsan/rtl/CMakeFiles/clang_rt.tsan-dynamic-x86_64.dir/tsan_interceptors_posix.cpp.o                                                                       22546    [1618/1890] Building CXX object compiler-rt/lib/memprof/CMakeFiles/RTMemprof_dynamic.x86_64.dir/memprof_interceptors.cpp.o                                                                               22547    [1619/1890] Building CXX object libcxx/src/CMakeFiles/cxx_static.dir/system_error.cpp.o                                                                                                                  22548    [1620/1890] Building CXX object libcxx/src/CMakeFiles/cxx_static.dir/thread.cpp.o                                                                                  
                                                                                                                                                                                                                       ...                                                                                                                                                                                                                                                                                                                                                                                                                                 22695     2722 |   ///    MacroBlockBegin: "^NS_MAP_BEGIN|\                                                                                                                                                       22696          |   ^                                                                                                                                                                                              22697    /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang/include/clang/Format/Format.h:2724:3: warning:                                                                      multi-line comment [-Wcomment]                                                                                                                                                                          22698     2724 |   ///    MacroBlockEnd: "^\                                                                                                                                                                      22699          |   ^                                                                                                                                                                                              22700    [5746/6206] /project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/compiler-wrapper-1.0-ktlnct2qtmi6hgkgym6mhpnqbza7z7ar/libexec/spack/gcc/                                                                     g++ -D_GNU_SOURCE -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -D__STDC_LIMIT_MACROS -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx                                                                     7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/tools/clang/tools/extra/modularize -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln                                                                     24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/modularize -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2je                                                                     f/spack-src/clang/include -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/tools/clang/in                                                                     clude -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/include -I/tmp/mark/spack-stage/sp                                                                     ack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/llvm/include -isystem /project/apps/apps_rhel9/spack/opt/spack/linux-broadwe                                                                     ll/zlib-ng-2.2.4-6xmfzukuwopqqkn6w6m5e3gzxrst3tlz/include -fPIC -fno-semantic-interposition -fvisibility-inlines-hidden -Werror=date-time -Wa                                                                     ll -Wextra -Wno-unused-parameter -Wwrite-strings -Wcast-qual -Wno-missing-field-initializers -pedantic -Wno-long-long -Wimplicit-fallthrough                                                                      -Wno-maybe-uninitialized -Wno-class-memaccess -Wno-redundant-move -Wno-pessimizing-move -Wno-noexcept-type -Wnon-virtual-dtor -Wdelete-non-vi                                                                     rtual-dtor -Wsuggest-override -Wmisleading-indentation -fdiagnostics-color -ffunction-sections -fdata-sections -fno-common -Woverloaded-virtu
              al -fno-strict-aliasing -O3 -DNDEBUG -std=c++14 -MD -MT tools/clang/tools/extra/modularize/CMakeFiles/modularize.dir/CoverageChecker.cpp.o -M
              F tools/clang/tools/extra/modularize/CMakeFiles/modularize.dir/CoverageChecker.cpp.o.d -o tools/clang/tools/extra/modularize/CMakeFiles/modul
              arize.dir/CoverageChecker.cpp.o -c /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra
              /modularize/CoverageChecker.cpp
  >> 22701    FAILED: runtimes/runtimes-stamps/runtimes-build /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ar
              iqx7l/runtimes/runtimes-stamps/runtimes-build
     22702    cd /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/runtimes/runtimes-bins && /project/apps
              /apps_rhel9/spack/opt/spack/linux-broadwell/cmake-3.30.9-6bd5emxodwl4nog6zbefnslggt7l37x5/bin/cmake --build .
     22703    [5748/6206] /project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/compiler-wrapper-1.0-ktlnct2qtmi6hgkgym6mhpnqbza7z7ar/libexec/spack/gcc/
              g++ -D_GNU_SOURCE -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -D__STDC_LIMIT_MACROS -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx                                                                     7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/tools/clang/tools/extra/pp-trace -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24
              a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/pp-trace -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/sp
              ack-src/clang/include -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/tools/clang/includ
              e -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/include -I/tmp/mark/spack-stage/spack-
              stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/llvm/include -isystem /project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/z
              lib-ng-2.2.4-6xmfzukuwopqqkn6w6m5e3gzxrst3tlz/include -fPIC -fno-semantic-interposition -fvisibility-inlines-hidden -Werror=date-time -Wall -
              Wextra -Wno-unused-parameter -Wwrite-strings -Wcast-qual -Wno-missing-field-initializers -pedantic -Wno-long-long -Wimplicit-fallthrough -Wno                                                                     -maybe-uninitialized -Wno-class-memaccess -Wno-redundant-move -Wno-pessimizing-move -Wno-noexcept-type -Wnon-virtual-dtor -Wdelete-non-virtua                                                                     l-dtor -Wsuggest-override -Wmisleading-indentation -fdiagnostics-color -ffunction-sections -fdata-sections -fno-common -Woverloaded-virtual -                                                                     fno-strict-aliasing -O3 -DNDEBUG -std=c++14 -MD -MT tools/clang/tools/extra/pp-trace/CMakeFiles/pp-trace.dir/PPCallbacksTracker.cpp.o -MF too                                                                     ls/clang/tools/extra/pp-trace/CMakeFiles/pp-trace.dir/PPCallbacksTracker.cpp.o.d -o tools/clang/tools/extra/pp-trace/CMakeFiles/pp-trace.dir/
              PPCallbacksTracker.cpp.o -c /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/pp-tra
              ce/PPCallbacksTracker.cpp
     22704    [5749/6206] /project/apps/apps_rhel9/spack/opt/spack/linux-broadwell/compiler-wrapper-1.0-ktlnct2qtmi6hgkgym6mhpnqbza7z7ar/libexec/spack/gcc/
              g++ -D_GNU_SOURCE -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -D__STDC_LIMIT_MACROS -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx
              7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/tools/clang/tools/extra/clang-include-fixer/tool -I/tmp/mark/spack-stage/spack-stage-llvm-14.                                                                     0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/clang-include-fixer/tool -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ari
              qx7leln24a3czpukxi6kgokfd2jef/spack-src/clang/include -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-
              build-ariqx7l/tools/clang/include -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-build-ariqx7l/includ                                                                     e -I/tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/llvm/include -I/tmp/mark/spack-stage/spack-stage                                                                     -llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/clang-include-fixer/tool/.. -isystem /project/apps/apps_rhel9/spack
              /opt/spack/linux-broadwell/zlib-ng-2.2.4-6xmfzukuwopqqkn6w6m5e3gzxrst3tlz/include -fPIC -fno-semantic-interposition -fvisibility-inlines-hidd                                                                     en -Werror=date-time -Wall -Wextra -Wno-unused-parameter -Wwrite-strings -Wcast-qual -Wno-missing-field-initializers -pedantic -Wno-long-long                                                                      -Wimplicit-fallthrough -Wno-maybe-uninitialized -Wno-class-memaccess -Wno-redundant-move -Wno-pessimizing-move -Wno-noexcept-type -Wnon-virt                                                                     ual-dtor -Wdelete-non-virtual-dtor -Wsuggest-override -Wmisleading-indentation -fdiagnostics-color -ffunction-sections -fdata-sections -fno-c                                                                     ommon -Woverloaded-virtual -fno-strict-aliasing -O3 -DNDEBUG -std=c++14 -MD -MT tools/clang/tools/extra/clang-include-fixer/tool/CMakeFiles/c                                                                     lang-include-fixer.dir/ClangIncludeFixer.cpp.o -MF tools/clang/tools/extra/clang-include-fixer/tool/CMakeFiles/clang-include-fixer.dir/ClangI                                                                     ncludeFixer.cpp.o.d -o tools/clang/tools/extra/clang-include-fixer/tool/CMakeFiles/clang-include-fixer.dir/ClangIncludeFixer.cpp.o -c /tmp/ma                                                                     rk/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/clang-include-fixer/tool/ClangIncludeFixe                                                                     r.cpp                                                                                                                                                                                                    22705    In file included from /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/clang-includ                                                                     e-fixer/tool/../IncludeFixer.h:14,                                                                                                                                                                       22706                     from /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang-tools-extra/clang-includ                                                                     e-fixer/tool/ClangIncludeFixer.cpp:11:                                                                                                                                                                   22707    /tmp/mark/spack-stage/spack-stage-llvm-14.0.6-ariqx7leln24a3czpukxi6kgokfd2jef/spack-src/clang/include/clang/Format/Format.h:435:5: warning:                                                                      multi-line comment [-Wcomment]                                                                                                                                                                                                                    

Information on your system

$ spack debug report

Additional information

Maintainers tag: @haampie @skosukhin @trws

Build logs:
spack-build-env.txt
spack-build-out.txt
spack-build-01-cmake-out.txt
spack-build-02-build-out.txt
spack-build-env-mods.txt

The package.py of my custom relion package, trying to install with relion@5 +python +cuda cuda_arch=89 (or just anything really)

package.py

General information

  • I have run spack debug report and reported the version of Spack/Python/Platform
  • I have run spack maintainers <name-of-the-package> and @mentioned any maintainers
  • I have uploaded the build log and environment files
  • I have searched the issues of this repo and believe this is not a duplicate

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