genomics-status/environment.yml at master · ssjunnebo/genomics-status · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
channels:
  - conda-forge
dependencies:
  - python=3.12
  - pango
  - pandas
  - psycopg2
  - open-fonts
  - xorg-libxrender
  - xorg-libxext
  - xorg-libxau
  - atlassian-python-api
  - cffi
  - python-couchdb
  - ecdsa
  - httplib2
  - ibmcloudant
  - markdown
  - matplotlib
  - numpy
  - oauth2
  - openpyxl
  - pycryptodome
  - pyparsing
  - python-dateutil
  - pytz
  - pyyaml
  - requests
  - selenium
  - setuptools
  - simplejson
  - six
  - slack_sdk
  - tornado
  - zenpy
  - ipdb
  - ruff
  - selenium
  - pre_commit
  - pip:
      - backports.ssl_match_hostname
      - nest_asyncio
      - utils
      - git+https://github.com/SciLifeLab/genologics.git
      - git+https://github.com/NationalGenomicsInfrastructure/genologics_sql.git
      - weasyprint==68.0
platforms:
  - linux-64 # For Linux
  - osx-64  # For Apple Intel
  - osx-arm64  # For Apple Silicon, e.g. M1/M2
  - linux-aarch64  # aka arm64, use for Docker on Apple Silicon