starsim/pyproject.toml at main · starsimhub/starsim · GitHub

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[build-system]
requires = ["setuptools", "setuptools-scm"]
build-backend = "setuptools.build_meta"

[project]
name = "starsim"
dynamic = ["version"]
description = "A fast, flexible agent-based disease modeling framework"
readme = "README.md"
requires-python = ">=3.11"
license = "MIT"
keywords = ["agent-based model", "simulation", "disease", "epidemiology"]

authors = [
  { name = "Starsim Development Team", email = "info@starsim.org" },
  { name = "Cliff Kerr" },
  { name = "Robyn Stuart" },
  { name = "Romesh Abeysuriya" },
  { name = "Paula Sanz-Leon" },
  { name = "Jamie Cohen" },
  { name = "Daniel Klein" }
]

classifiers = [
  "Intended Audience :: Science/Research",
  "Operating System :: OS Independent",
  "Programming Language :: Python :: 3",
  "Topic :: Software Development :: Libraries :: Python Modules",
  "Development Status :: 5 - Production/Stable",
]

dependencies = [
    "numpy>=2.0.0",
    "pandas>=2.0.0",
    "sciris>=3.2.8",
    "numba>=0.57.0",
    "scipy",
    "networkx",
    "matplotlib",
    "seaborn",
    "optuna"
]

[project.optional-dependencies]

# Accelerates numerical performance on some systems
fastmath = [
  "mkl",
  "intel-cmplr-lib-rt"
]

# For tests and docs
dev = [
    "pytest>=7.4",
    "pytest-cov",
    "pytest-env",
    "pytest-xdist",
    "pylint",
    "quartodoc",
    "jupyter",
    "jupyter-cache",
    "jupytext",
    "dask[complete]",
]

# For exactly reproducible results (replaces uv.lock)
lock = [
    "alembic==1.18.4",
    "colorlog==6.10.1",
    "contourpy==1.3.3",
    "cycler==0.12.1",
    "dill==0.4.1",
    "et-xmlfile==2.0.0",
    "fonttools==4.62.1",
    "gitdb==4.0.12",
    "gitpython==3.1.46",
    "greenlet==3.3.2",
    "jellyfish==1.2.1",
    "jsonpickle==4.1.1",
    "kiwisolver==1.5.0",
    "line-profiler==5.0.2",
    "llvmlite==0.47.0",
    "mako==1.3.10",
    "markupsafe==3.0.3",
    "matplotlib==3.10.8",
    "memory-profiler==0.61.0",
    "multiprocess==0.70.19",
    "networkx==3.6.1",
    "numba==0.65.0",
    "numpy==2.4.4",
    "openpyxl==3.1.5",
    "optuna==4.8.0",
    "packaging==26.0",
    "pandas==3.0.2",
    "pillow==12.2.0",
    "psutil==7.2.2",
    "pyparsing==3.3.2",
    "python-dateutil==2.9.0.post0",
    "pyyaml==6.0.3",
    "scipy==1.17.1",
    "sciris==3.2.9",
    "seaborn==0.13.2",
    "setuptools==82.0.1",
    "six==1.17.0",
    "smmap==5.0.3",
    "sqlalchemy==2.0.48",
    "tqdm==4.67.3",
    "typing-extensions==4.15.0",
    "xlsxwriter==3.2.9",
    "zstandard==0.25.0",
]

optuna = ["scikit-learn"]

[project.urls]
"Website" = "https://starsim.org"
"Source" = "https://github.com/starsimhub/starsim/"

[tool.setuptools.packages.find]
where = ["."]
include = ["starsim*"]

[tool.setuptools.package-data]
starsim = ["*.ipynb", "*.rst", "*.csv"]

[tool.setuptools.dynamic]
version = {attr = "starsim.version.__version__"}