Question about the API

[Bloeci]

I wanna test the API using the following command:

curl -X POST \
  -F q=@/home/max/5zxd.cif \
  -F 'database[]=esm30_folddisco' \
  -F 'database[]=afdb-proteome_folddisco' \
  -F 'database[]=afdb50_folddisco' \
  -F 'database[]=pdb100_folddisco' \
  -F 'motif=A15,A16,A18,A20,A39,A40,A41,A42,A43,A44,A45,A46,A47,A178,A179,A206,A223' \
  https://search.foldseek.com/api/ticket/folddisco

And get the message

{"id":"xjH6pbivtdMRshqIkMXcAKcxBcntY9HhAQ1Z7w","status":"COMPLETE"}

Therefore, I thought I could download the results. From this issue from foldseek steineggerlab/foldseek#380 if tried the following, adding a /0 at the end:

curl -X GET https://search.foldseek.com/api/result/xjH6pbivtdMRshqIkMXcAKcxBcntY9HhAQ1Z7w/0

but only get the message:

Invalid job type.

How can I download the results / full table? The file 5zxd.cif was downloaded from the pdb (nothing processed)

[milot-mirdita]

We have not written documentation for the api yet and things are still changing, especially how structures are fetched will likely still change at some point.

The endpoint to fetch the results is here:
https://search.foldseek.com/api/result/folddisco/xjH6pbivtdMRshqIkMXcAKcxBcntY9HhAQ1Z7w

Note the result/folddisco and the missing /0

[Bloeci]

Thank you very much for the fast response. That helps :)
Fantastic work, by the way :)

[augustus58978]

If I may ask one question on this topic too: how can we access the result using the API? I get the message "Job is not complete" when trying to access the URL using this structure https://search.foldseek.com/api/result/ID_HERE

Thank you! :)

[milot-mirdita]

https://search.foldseek.com/api/result/folddisco/ID_HERE should work