sunbeam/pyproject.toml at 36d3a37b8b98f784e9ec71bbe2e4fe7b5ee55f0b · sunbeam-labs/sunbeam · GitHub

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[project]
name = "sunbeamlib"
dynamic = ["version"]
description = "A snakemake utility for metagenomic sequencing analysis"
readme = "README.md"
requires-python = ">=3.11"

authors = [
  {name = "Erik Clarke"},
  {name = "Charlie Bushman"},
  {name = "Chunyu Zhao"},
  {name = "Jesse Connell"},
  {name = "Louis Taylor"},
  {name = "Kyle Bittinger"},
]
maintainers = [
  {name = "Charlie Bushman", email = "ctbushman@gmail.com"}
]

classifiers = [
  "Programming Language :: Python :: 3",
  "Programming Language :: Python :: 3.11",
  "Programming Language :: Python :: 3.12",
  "Programming Language :: Python :: 3.13",
  "Programming Language :: Python :: 3 :: Only",
]

dependencies = [
  "snakemake==9.6.1",
  "more-itertools==10.7.0",
  "pyyaml==6.0.2",
  "pandas==2.3.0",
]
[project.optional-dependencies]
dev = [
  "black==24.10.0",
  "snakefmt==0.11.0",
  "pytest==8.4.1",
]
ai = [
  "openai==1.88.0",
]

[project.urls]
"Homepage" = "https://github.com/sunbeam-labs/sunbeam"
"Bug Reports" = "https://github.com/sunbeam-labs/sunbeam/issues"
"Docs" = "https://sunbeam.readthedocs.io/en/stable/"
"Source" = "https://github.com/sunbeam-labs/sunbeam"

[project.scripts]
sunbeam = "sunbeam.scripts.sunbeam:main"

[tool.setuptools.package-dir]
sunbeam = "sunbeam"

[tool.setuptools.package-data]
"sunbeam" = [
  "configs/*.yml",
  "configs/*.yaml",
  "extensions/.gitkeep",
  "workflow/Snakefile",
  "workflow/rules/*.smk",
  "workflow/scripts/*.py",
  "workflow/envs/*.yml",
  "workflow/envs/*.Dockerfile",
]

[build-system]
requires = ["setuptools>=61.0.0", "wheel"]
build-backend = "setuptools.build_meta"

[tool.setuptools.dynamic]
version = {attr = "sunbeam.__version__"}