-
Notifications
You must be signed in to change notification settings - Fork 44
93 lines (79 loc) · 2.5 KB
/
build.yml
File metadata and controls
93 lines (79 loc) · 2.5 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
name: Build
on:
workflow_call:
jobs:
pypi-build:
name: Build PyPi distribution 🐍
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v5
with:
persist-credentials: false
- name: Set up Python
uses: actions/setup-python@v6
with:
python-version: "3.x"
- name: Install pypa/build
run: >-
python3 -m
pip install
build
--user
- name: Build a binary wheel and a source tarball
run: python3 -m build
- name: Store the distribution packages
uses: actions/upload-artifact@v5
with:
name: python-package-distributions
path: dist/
docker-build:
name: Build and test Docker images 🐳
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v5
- name: Build test image
uses: docker/build-push-action@v7
with:
context: .
file: ./Dockerfile
load: true
tags: sunbeamlabs/sunbeam:test
- name: Test full image
run: |
docker run --rm -v ${{ github.workspace }}/tests:/tests sunbeamlabs/sunbeam:test pytest /tests
- name: Build slim test image
uses: docker/build-push-action@v7
with:
context: .
file: ./slim.Dockerfile
load: true
tags: sunbeamlabs/sunbeam:test-slim
- name: Test slim image
run: |
docker run --rm -v ${{ github.workspace }}/tests:/tests sunbeamlabs/sunbeam:test-slim pytest /tests
docker-build-worker-images:
name: Build worker images 🐳
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v5
- name: Build cutadapt image
uses: docker/build-push-action@v7
with:
context: .
file: sunbeam/workflow/envs/cutadapt.Dockerfile
load: true
tags: sunbeamlabs/cutadapt:test
- name: Build komplexity image
uses: docker/build-push-action@v7
with:
context: .
file: sunbeam/workflow/envs/komplexity.Dockerfile
load: true
tags: sunbeamlabs/komplexity:test
- name: Build QC image
uses: docker/build-push-action@v7
with:
context: .
file: sunbeam/workflow/envs/qc.Dockerfile
load: true
tags: sunbeamlabs/qc:test