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ver 0.1.11
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Project.toml

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name = "PhyNEST"
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uuid = "115de871-c282-4823-a74f-b03678acf966"
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authors = ["Sungsik Kong"]
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version = "0.1.10"
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version = "0.1.11"
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[deps]
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CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"

src/miscellaneous.jl

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@@ -191,7 +191,7 @@ function showallDF(df::DataFrame) CSV.show(df,allrows=true) end
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filename=""::AbstractString
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Conducts HyDe: Hybrid Detectioo using Phylogenetic invariants. See Blischak et al., (2018) (https://doi.org/10.1093/sysbio/syy023) and the manual (https://hybridization-detection.readthedocs.io) for more information.
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Conducts HyDe: Hybrid Detection using Phylogenetic invariants. See Blischak et al., (2018) (https://doi.org/10.1093/sysbio/syy023) and the manual (https://hybridization-detection.readthedocs.io) for more information.
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This function replicates `run_hyde.py` in the original python package. The map file, a two-column table with individual names in the first column and the name of the population that it belongs to in the second column
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(see example below) is not necessary to start the analysis. If the map file is not provided, each sequnece in the data is assumed to represent distinct species.
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